Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | EL081_RS01100 | Genome accession | NZ_LR134266 |
| Coordinates | 188232..189185 (+) | Length | 317 a.a. |
| NCBI ID | WP_126403668.1 | Uniprot ID | - |
| Organism | Streptococcus viridans strain NCTC3166 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 183232..194185
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL081_RS01060 (NCTC3166_00215) | - | 183996..184373 (+) | 378 | WP_048717460.1 | DUF1033 family protein | - |
| EL081_RS01065 (NCTC3166_00216) | comYA | 184480..185421 (+) | 942 | WP_126403664.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EL081_RS01070 (NCTC3166_00217) | comYB | 185363..186385 (+) | 1023 | WP_126403665.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EL081_RS01075 (NCTC3166_00218) | comYC | 186382..186699 (+) | 318 | WP_023022076.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EL081_RS01080 | comGD/cglD | 186668..187093 (+) | 426 | WP_042507426.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EL081_RS01085 (NCTC3166_00220) | comGE | 187059..187352 (+) | 294 | WP_006595134.1 | competence type IV pilus minor pilin ComGE | - |
| EL081_RS01090 (NCTC3166_00221) | comGF/cglF | 187336..187788 (+) | 453 | WP_048717662.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EL081_RS01095 (NCTC3166_00222) | comGG | 187754..188200 (+) | 447 | WP_126403667.1 | competence type IV pilus minor pilin ComGG | - |
| EL081_RS01100 (NCTC3166_00223) | comYH | 188232..189185 (+) | 954 | WP_126403668.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EL081_RS01105 (NCTC3166_00224) | - | 189234..190430 (+) | 1197 | WP_126403669.1 | acetate kinase | - |
| EL081_RS01110 (NCTC3166_00225) | - | 190583..191257 (+) | 675 | WP_224781595.1 | type II CAAX endopeptidase family protein | - |
| EL081_RS01115 (NCTC3166_00226) | folP | 191416..192372 (+) | 957 | WP_164555425.1 | dihydropteroate synthase | - |
| EL081_RS01120 (NCTC3166_00227) | - | 192389..193693 (+) | 1305 | WP_126403671.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36075.90 Da Isoelectric Point: 4.3083
>NTDB_id=1119547 EL081_RS01100 WP_126403668.1 188232..189185(+) (comYH) [Streptococcus viridans strain NCTC3166]
MNFEKIEKAYGYLLENTQTIQNDLQTNFYDALVEQNAIYLDGQTELTLVKENNQRLKDLNLNKEEWRRSFQYLLMKAAQT
EPLQANHQFTPDGIGFLLVFLVDQLASSDQVDVLEMGSGTGNLAQTLMNNCQRSLDYLGLEIDDLLIDLAASMAEVMKAD
VNFAQGDAIRPQVLKESDVIISDLPVGYYPDDAIASRYQVASPQGHTYAHHLLIEQSLKYLKPGGVAIFLAPNDLLTSEQ
SPLLKKWMQDHAQVLAMVTLPENLFRSANLAKTIFVFRKQEEAVVQPFVYPLTDLQDQEDLMKFRESFQNWNKESEI
MNFEKIEKAYGYLLENTQTIQNDLQTNFYDALVEQNAIYLDGQTELTLVKENNQRLKDLNLNKEEWRRSFQYLLMKAAQT
EPLQANHQFTPDGIGFLLVFLVDQLASSDQVDVLEMGSGTGNLAQTLMNNCQRSLDYLGLEIDDLLIDLAASMAEVMKAD
VNFAQGDAIRPQVLKESDVIISDLPVGYYPDDAIASRYQVASPQGHTYAHHLLIEQSLKYLKPGGVAIFLAPNDLLTSEQ
SPLLKKWMQDHAQVLAMVTLPENLFRSANLAKTIFVFRKQEEAVVQPFVYPLTDLQDQEDLMKFRESFQNWNKESEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1119547 EL081_RS01100 WP_126403668.1 188232..189185(+) (comYH) [Streptococcus viridans strain NCTC3166]
ATGAATTTCGAAAAAATTGAGAAAGCCTACGGCTACCTATTAGAGAATACCCAAACTATCCAAAATGATTTACAGACCAA
CTTTTATGATGCTCTAGTGGAGCAGAATGCCATCTATCTGGATGGGCAAACAGAGTTGACTCTAGTGAAGGAAAACAACC
AGCGCCTGAAGGACTTGAACTTAAACAAGGAAGAGTGGCGTCGTTCCTTCCAGTATCTTTTGATGAAGGCTGCCCAAACA
GAGCCCCTACAGGCCAATCACCAATTTACGCCAGATGGGATTGGATTTCTTCTGGTCTTCCTAGTGGATCAGTTGGCTAG
TTCCGATCAAGTGGATGTGCTAGAAATGGGGAGTGGAACAGGGAACTTGGCCCAAACCTTGATGAACAACTGTCAGCGTT
CCTTAGATTATTTGGGCTTGGAAATTGATGATCTCTTGATTGACCTTGCGGCTAGTATGGCAGAAGTGATGAAGGCGGAT
GTGAATTTTGCCCAAGGTGATGCCATTCGTCCACAAGTTTTGAAAGAGAGCGATGTGATTATCAGCGATTTACCTGTCGG
TTATTATCCAGATGATGCCATTGCGAGTCGTTACCAGGTCGCTTCCCCTCAGGGCCACACCTATGCCCATCATTTATTGA
TTGAACAATCGCTAAAATACTTAAAACCAGGTGGCGTCGCTATTTTTCTAGCTCCGAATGATCTCTTGACGAGTGAGCAG
AGTCCTCTGCTGAAAAAATGGATGCAGGATCATGCTCAGGTCTTGGCCATGGTGACCTTGCCAGAGAACCTCTTTCGATC
AGCCAATCTAGCAAAAACCATCTTTGTTTTCCGCAAGCAAGAAGAAGCGGTGGTCCAACCATTTGTCTATCCTTTGACTG
ATTTGCAAGACCAGGAAGACCTCATGAAATTCCGTGAAAGTTTTCAAAACTGGAATAAAGAAAGTGAAATTTAA
ATGAATTTCGAAAAAATTGAGAAAGCCTACGGCTACCTATTAGAGAATACCCAAACTATCCAAAATGATTTACAGACCAA
CTTTTATGATGCTCTAGTGGAGCAGAATGCCATCTATCTGGATGGGCAAACAGAGTTGACTCTAGTGAAGGAAAACAACC
AGCGCCTGAAGGACTTGAACTTAAACAAGGAAGAGTGGCGTCGTTCCTTCCAGTATCTTTTGATGAAGGCTGCCCAAACA
GAGCCCCTACAGGCCAATCACCAATTTACGCCAGATGGGATTGGATTTCTTCTGGTCTTCCTAGTGGATCAGTTGGCTAG
TTCCGATCAAGTGGATGTGCTAGAAATGGGGAGTGGAACAGGGAACTTGGCCCAAACCTTGATGAACAACTGTCAGCGTT
CCTTAGATTATTTGGGCTTGGAAATTGATGATCTCTTGATTGACCTTGCGGCTAGTATGGCAGAAGTGATGAAGGCGGAT
GTGAATTTTGCCCAAGGTGATGCCATTCGTCCACAAGTTTTGAAAGAGAGCGATGTGATTATCAGCGATTTACCTGTCGG
TTATTATCCAGATGATGCCATTGCGAGTCGTTACCAGGTCGCTTCCCCTCAGGGCCACACCTATGCCCATCATTTATTGA
TTGAACAATCGCTAAAATACTTAAAACCAGGTGGCGTCGCTATTTTTCTAGCTCCGAATGATCTCTTGACGAGTGAGCAG
AGTCCTCTGCTGAAAAAATGGATGCAGGATCATGCTCAGGTCTTGGCCATGGTGACCTTGCCAGAGAACCTCTTTCGATC
AGCCAATCTAGCAAAAACCATCTTTGTTTTCCGCAAGCAAGAAGAAGCGGTGGTCCAACCATTTGTCTATCCTTTGACTG
ATTTGCAAGACCAGGAAGACCTCATGAAATTCCGTGAAAGTTTTCAAAACTGGAATAAAGAAAGTGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
59.048 |
99.369 |
0.587 |
| comYH | Streptococcus mutans UA159 |
58.73 |
99.369 |
0.584 |