Detailed information NTG1116003

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: E0E14_RS08120
• Genome accession: NZ_LR027877
• Coordinates: 1617814..1618125 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate BPH3244
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1612814..1623125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0E14_RS08080	gcvT	1613350..1614441 (-)	1092	WP_000093351.1	glycine cleavage system aminomethyltransferase GcvT	-
E0E14_RS08085	-	1614600..1615124 (-)	525	WP_001015117.1	shikimate kinase	-
E0E14_RS08090	-	1615114..1615260 (-)	147	WP_001789879.1	hypothetical protein	-
E0E14_RS08095	-	1615357..1615524 (-)	168	Protein_1525	type IV pilus minor pilin ComGF family protein	-
E0E14_RS08100	-	1615572..1616744 (-)	1173	WP_000195429.1	IS256-like element IS256 family transposase	-
E0E14_RS08105	-	1616833..1617186 (-)	354	Protein_1527	type IV pilus minor pilin ComGF family protein	-
E0E14_RS08110	comGE	1617104..1617403 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
E0E14_RS08115	comGD	1617390..1617836 (-)	447	WP_001790850.1	competence type IV pilus minor pilin ComGD	Machinery gene
E0E14_RS08120	comGC	1617814..1618125 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
E0E14_RS08125	comGB	1618139..1619209 (-)	1071	WP_000775708.1	competence type IV pilus assembly protein ComGB	Machinery gene
E0E14_RS08130	comGA	1619181..1620155 (-)	975	WP_000697228.1	competence type IV pilus ATPase ComGA	Machinery gene
E0E14_RS08135	-	1620207..1620830 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
E0E14_RS08140	-	1620827..1621156 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
E0E14_RS08145	-	1621156..1622142 (-)	987	WP_000161314.1	ROK family glucokinase	-
E0E14_RS08150	-	1622139..1622342 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=1116003 E0E14_RS08120 WP_000472256.1 1617814..1618125(-) (comGC) [Staphylococcus aureus isolate BPH3244]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=1116003 E0E14_RS08120 WP_000472256.1 1617814..1618125(-) (comGC) [Staphylococcus aureus isolate BPH3244]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369