Detailed information NTG1106904

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ACLKM6_RS12595
• Genome accession: NZ_CP183890
• Coordinates: 2619103..2621244 (-)
• Length: 713 a.a.
• NCBI ID: WP_411686736.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain D11_NDM_tet(X5)
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2614103..2626244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM6_RS12580	-	2616570..2617406 (-)	837	WP_411686676.1	hypothetical protein	-
ACLKM6_RS12585	aroB	2617419..2618501 (-)	1083	WP_075167859.1	3-dehydroquinate synthase	-
ACLKM6_RS12590	aroK	2618524..2619066 (-)	543	WP_104487954.1	shikimate kinase AroK	-
ACLKM6_RS12595	pilQ	2619103..2621244 (-)	2142	WP_411686736.1	type IV pilus secretin PilQ	Machinery gene
ACLKM6_RS12600	pilP	2621305..2621832 (-)	528	WP_045795346.1	pilus assembly protein PilP	Machinery gene
ACLKM6_RS12605	pilO	2621832..2622551 (-)	720	WP_411686675.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACLKM6_RS12610	pilN	2622548..2623183 (-)	636	WP_005180516.1	PilN domain-containing protein	Machinery gene
ACLKM6_RS12615	pilM	2623183..2624241 (-)	1059	WP_104505685.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 713 a.a.
• Molecular weight: 77074.22 Da
• Isoelectric Point: 5.0549

>NTDB_id=1106904 ACLKM6_RS12595 WP_411686736.1 2619103..2621244(-) (pilQ) [Acinetobacter indicus strain D11_NDM_tet(X5)]
MNNLFRQFSMGAVAMAVMQVANAQVSITNIVPMQIPGQGTEIRVMFNGLPPQPAAYQLEQPSRLVLDFDKAQQSLKQASI
PVATREASSVDVSSDAQRARLTVNLAEAGAFTTRVEGNTFILKINSTQPAATPVAVQQTAQGVSNIGFQRGAEGEGQVVI
DLAGSNTPVDVQQQGSKIIVRTLGNKIPAHLARRLNVNDFATPVSTIDAQNDGGNGVITIQSAGSYEYMAYQAENKLTIS
LKRPVDKNPFKPRAAQSYTGKKISLDFQDIEVRRVLQLLADFTGINMVAADTVQGNITLRLKDVPWDQALDIILKTKNLD
KRRNGNVIWIAPVAELIKAEEEEAKAIAQSVKLAPLQTEYIQLNYAKAADIEKLITEGKNASNSRSGTSNSTANTDPLGD
SVGSLLSPRGTVSVDPRTNTLIINDTAQKIDQIRSMIDLLDVSVKQVMIEARIVRATTDFTKEMGVKWGILSQGIMNNNH
LLVGGSDTTLWNLREPEFDDERGGYTYEIERPQNLNVDLGVTSPGASRIAFGLISLSDFMLDLELSALQADGYGEVISTP
KVLTADKQQAKVASGTQIPYQSAEGGGANAVSTTEFIDATLSLDVTPSITPDGKVQMNLNITSDSPGAPTPTGQLTINKN
SINTNVLVDNGETVVLGGIFEQQTANQQTKVPFLGDIPYLGRLFRKDIKSDNKRELLIFVTPRIVNDSVSRNH

Nucleotide

• Length: 2142 bp

>NTDB_id=1106904 ACLKM6_RS12595 WP_411686736.1 2619103..2621244(-) (pilQ) [Acinetobacter indicus strain D11_NDM_tet(X5)]
ATGAACAATTTGTTCCGTCAGTTTTCAATGGGCGCTGTTGCGATGGCCGTCATGCAAGTGGCCAATGCGCAGGTCAGCAT
TACCAATATTGTACCAATGCAAATTCCAGGACAAGGTACTGAAATTCGTGTCATGTTCAATGGCTTGCCACCTCAGCCTG
CAGCCTATCAGCTTGAGCAGCCATCACGTTTGGTGCTGGATTTTGATAAAGCCCAGCAGAGCTTAAAACAGGCCAGCATT
CCGGTTGCGACCCGGGAAGCCAGCTCGGTGGATGTCAGTTCCGATGCCCAGCGTGCACGTTTAACGGTCAATCTAGCTGA
AGCGGGTGCTTTTACTACCCGTGTCGAAGGCAATACTTTTATTCTTAAAATTAACAGCACTCAGCCAGCCGCAACACCAG
TAGCTGTACAGCAGACGGCTCAAGGCGTATCGAATATCGGCTTCCAGCGTGGTGCAGAAGGGGAAGGTCAGGTAGTAATT
GACCTGGCAGGCAGCAATACCCCGGTCGATGTGCAACAGCAAGGCAGTAAAATTATTGTCCGTACTTTGGGCAATAAAAT
TCCTGCGCATCTGGCACGCCGTTTAAATGTCAATGATTTTGCCACGCCGGTATCTACCATTGATGCGCAAAATGATGGTG
GTAATGGGGTGATTACCATTCAGTCTGCCGGAAGCTATGAATATATGGCGTATCAGGCGGAAAATAAACTGACCATTAGC
CTGAAACGCCCGGTAGATAAGAACCCGTTTAAACCACGTGCAGCACAAAGCTATACTGGCAAAAAGATTTCTTTAGATTT
CCAGGATATTGAAGTGCGTCGTGTGCTGCAGTTACTGGCGGATTTTACTGGAATTAACATGGTTGCCGCCGATACGGTAC
AAGGCAATATCACCTTACGTCTCAAAGATGTGCCGTGGGATCAGGCGCTGGATATTATTTTAAAAACCAAAAATCTGGAT
AAACGCCGTAATGGCAATGTGATCTGGATTGCACCCGTCGCAGAGCTGATCAAGGCCGAAGAAGAAGAAGCCAAAGCGAT
TGCTCAAAGCGTCAAGCTGGCGCCGCTGCAAACCGAATATATTCAGTTAAATTATGCCAAGGCTGCTGATATCGAGAAAC
TGATTACCGAAGGTAAAAATGCGTCTAATTCCCGTAGTGGCACAAGTAACAGTACAGCCAATACTGATCCACTCGGTGAT
AGTGTCGGTAGTCTGCTCAGTCCACGTGGTACGGTGTCAGTCGATCCACGAACCAACACCCTGATTATTAATGATACCGC
GCAAAAGATTGACCAGATTCGCAGCATGATTGACTTGCTGGATGTGTCGGTGAAACAGGTGATGATTGAAGCGCGTATTG
TGCGTGCCACCACTGACTTTACCAAAGAGATGGGGGTCAAGTGGGGCATCCTGTCACAAGGGATCATGAATAATAACCAT
CTTCTGGTCGGTGGTAGTGATACCACACTGTGGAATTTACGTGAGCCGGAATTTGACGACGAGCGTGGTGGTTATACCTA
TGAAATTGAACGTCCACAAAACCTGAATGTCGATTTGGGGGTCACCAGCCCAGGTGCGAGCCGGATTGCTTTTGGTCTTA
TCAGCCTATCTGACTTTATGCTGGATTTAGAGCTGTCTGCCTTACAAGCTGATGGCTATGGTGAAGTAATTTCGACACCG
AAAGTGCTGACTGCTGATAAGCAGCAGGCCAAAGTGGCTTCAGGTACGCAGATTCCATATCAGTCTGCTGAAGGAGGCGG
TGCCAATGCAGTGTCCACCACCGAATTTATTGATGCAACTTTAAGTCTGGATGTTACGCCAAGTATTACCCCGGATGGTA
AAGTACAGATGAACCTGAATATCACCAGTGATAGTCCGGGAGCACCAACGCCGACCGGTCAGCTCACCATTAACAAAAAC
TCGATCAATACCAATGTACTGGTCGATAATGGTGAAACCGTCGTACTCGGTGGTATTTTTGAGCAGCAGACAGCCAATCA
GCAAACCAAAGTGCCATTCCTGGGGGATATTCCGTATTTAGGCCGTTTATTCCGTAAAGATATTAAATCGGACAATAAAC
GTGAGTTGCTGATTTTTGTGACACCACGAATTGTTAATGACAGTGTTTCAAGAAATCATTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (547-705)

• Secretin and TonB N terminus short domain (STN) (290-332)

• AMIN domain (AMIN) (40-121)

• Bacterial type II/III secretion system short domain (Secretin_N) (359-446)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	76.87	100	0.778
pilQ	Acinetobacter baumannii strain A118	76.731	100	0.777
comQ	Acinetobacter baylyi ADP1	74.825	100	0.75
pilQ	Pseudomonas aeruginosa PAK	40.598	98.457	0.4
pilQ	Legionella pneumophila strain ERS1305867	38.277	99.299	0.38
pilQ	Legionella pneumophila strain Lp02	38.277	99.299	0.38