Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ACLKM6_RS12610 | Genome accession | NZ_CP183890 |
| Coordinates | 2622548..2623183 (-) | Length | 211 a.a. |
| NCBI ID | WP_005180516.1 | Uniprot ID | N9MGL9 |
| Organism | Acinetobacter indicus strain D11_NDM_tet(X5) | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2617548..2628183
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLKM6_RS12590 | aroK | 2618524..2619066 (-) | 543 | WP_104487954.1 | shikimate kinase AroK | - |
| ACLKM6_RS12595 | pilQ | 2619103..2621244 (-) | 2142 | WP_411686736.1 | type IV pilus secretin PilQ | Machinery gene |
| ACLKM6_RS12600 | pilP | 2621305..2621832 (-) | 528 | WP_045795346.1 | pilus assembly protein PilP | Machinery gene |
| ACLKM6_RS12605 | pilO | 2621832..2622551 (-) | 720 | WP_411686675.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACLKM6_RS12610 | pilN | 2622548..2623183 (-) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| ACLKM6_RS12615 | pilM | 2623183..2624241 (-) | 1059 | WP_104505685.1 | pilus assembly protein PilM | Machinery gene |
| ACLKM6_RS12620 | ponA | 2624413..2626989 (+) | 2577 | WP_411686674.1 | penicillin-binding protein PBP1a | - |
| ACLKM6_RS12625 | - | 2627032..2627835 (-) | 804 | WP_016658442.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23494.92 Da Isoelectric Point: 7.9757
>NTDB_id=1106907 ACLKM6_RS12610 WP_005180516.1 2622548..2623183(-) (pilN) [Acinetobacter indicus strain D11_NDM_tet(X5)]
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
Nucleotide
Download Length: 636 bp
>NTDB_id=1106907 ACLKM6_RS12610 WP_005180516.1 2622548..2623183(-) (pilN) [Acinetobacter indicus strain D11_NDM_tet(X5)]
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAACCATAAACTGCAGGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAAAATCTGGATGTACAGTTAAAGTCGCTGGAAGGTCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGTTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAACCATAAACTGCAGGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAAAATCTGGATGTACAGTTAAAGTCGCTGGAAGGTCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGTTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.09 |
100 |
0.711 |
| comN | Acinetobacter baylyi ADP1 |
70.616 |
100 |
0.706 |