Detailed information NTG1106908

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACLKM6_RS12615
• Genome accession: NZ_CP183890
• Coordinates: 2623183..2624241 (-)
• Length: 352 a.a.
• NCBI ID: WP_104505685.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain D11_NDM_tet(X5)
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2618183..2629241

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM6_RS12590	aroK	2618524..2619066 (-)	543	WP_104487954.1	shikimate kinase AroK	-
ACLKM6_RS12595	pilQ	2619103..2621244 (-)	2142	WP_411686736.1	type IV pilus secretin PilQ	Machinery gene
ACLKM6_RS12600	pilP	2621305..2621832 (-)	528	WP_045795346.1	pilus assembly protein PilP	Machinery gene
ACLKM6_RS12605	pilO	2621832..2622551 (-)	720	WP_411686675.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACLKM6_RS12610	pilN	2622548..2623183 (-)	636	WP_005180516.1	PilN domain-containing protein	Machinery gene
ACLKM6_RS12615	pilM	2623183..2624241 (-)	1059	WP_104505685.1	pilus assembly protein PilM	Machinery gene
ACLKM6_RS12620	ponA	2624413..2626989 (+)	2577	WP_411686674.1	penicillin-binding protein PBP1a	-
ACLKM6_RS12625	-	2627032..2627835 (-)	804	WP_016658442.1	putative RNA methyltransferase	-
ACLKM6_RS12630	mraY	2627901..2629019 (-)	1119	WP_005180530.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38981.65 Da
• Isoelectric Point: 4.5587

>NTDB_id=1106908 ACLKM6_RS12615 WP_104505685.1 2623183..2624241(-) (pilM) [Acinetobacter indicus strain D11_NDM_tet(X5)]
MRRLYRKPSKGLIGVDISSTSVKLLELSVKNDRYWVESYALVPLPEGSVVEKNILNPEAVGDALERAFNLANTPTTAAAL
AIPTSMVISKTIEMDADMTDDEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRLENVESRCEAIEL
AGLTPKVADVESFAIENAFKVFADTLPMGVNTIGVLDIGHTMTTLSVLKDNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKSRTLPDDYDIEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSSKIDIKRIESDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1106908 ACLKM6_RS12615 WP_104505685.1 2623183..2624241(-) (pilM) [Acinetobacter indicus strain D11_NDM_tet(X5)]
GTGCGCAGGTTATATCGTAAACCGAGTAAGGGGTTAATAGGTGTAGATATTAGTTCTACTTCTGTTAAGTTATTGGAGCT
CTCTGTAAAGAATGATCGTTACTGGGTGGAAAGTTACGCCTTGGTACCGCTCCCAGAGGGCAGTGTGGTTGAGAAAAATA
TTCTGAATCCTGAAGCTGTAGGGGATGCGCTCGAGCGTGCCTTTAATTTGGCCAATACACCGACAACAGCTGCCGCTTTA
GCGATTCCAACCTCAATGGTAATTAGCAAGACCATTGAGATGGATGCCGATATGACGGATGACGAACGTGAAGTTCAAAT
CCGGATGGATGCAGAGCAATATATTCCTTTCCCATTAGATGAAGTTAGCCTGGACTTTGAGGTGCTGCCTGATCGTCTGG
CCAATCCAAACCGGGTCAATGTTTTGCTGGTGGCGACACGACTGGAAAATGTCGAGAGTCGCTGTGAAGCGATTGAACTG
GCCGGTTTAACCCCAAAAGTGGCAGATGTTGAAAGCTTTGCCATTGAAAATGCCTTTAAAGTCTTCGCCGATACCTTGCC
GATGGGGGTAAATACCATTGGTGTGTTAGACATTGGTCATACTATGACCACGCTGTCGGTACTCAAAGACAATAAAATTA
TCTATACCCGCGAGCAGGTCTTTGGTGGCAAGCAGCTGACCCAGGAAATCCAGAACCGTTATGGTCTGTCCTTTGAAGAA
GCCGGCCGCGCCAAGAAAAGCCGTACCTTGCCAGATGATTACGATATTGAAGTGCTGGAGCCATTCCTTGAGGCGGTGGT
ACAGCAGGCGGCACGTTCGCTGCAGTTCTTCTTCTCTTCATCGCAGTTTAATGAAATTGACCATATTCTGCTGGCCGGTG
GGAATGCCAATATTCCAGGCCTGGCCAAGCTACTACAGCAAAAACTGGGTTACCGCGTCACCATTGCCAATCCGTTTTTA
CAGATGGGTTTCTCCTCCAAAATTGATATTAAAAGAATTGAAAGCGATGCCTCTTCATTGATGGTGGCATGTGGCTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	84.659	100	0.847
comM	Acinetobacter nosocomialis M2	84.659	100	0.847
comM	Acinetobacter baylyi ADP1	78.693	100	0.787
pilM	Legionella pneumophila strain ERS1305867	41.243	100	0.415