Detailed information NTG1105968

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: V3C22_RS08810
• Genome accession: NZ_CP183775
• Coordinates: 1795228..1795623 (-)
• Length: 131 a.a.
• NCBI ID: WP_002263454.1
• Uniprot ID: Q8DS68
• Organism: Streptococcus mutans strain Xc
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1790228..1800623

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3C22_RS08785 (V3C22_08785)	-	1790279..1790482 (-)	204	Protein_1683	hypothetical protein	-
V3C22_RS08790 (V3C22_08790)	-	1790548..1791855 (-)	1308	WP_002274168.1	extracellular solute-binding protein	-
V3C22_RS08795 (V3C22_08795)	-	1791848..1792528 (-)	681	WP_002284947.1	response regulator transcription factor	-
V3C22_RS08800 (V3C22_08800)	-	1792528..1793850 (-)	1323	WP_002263456.1	sensor histidine kinase	-
V3C22_RS08805 (V3C22_08805)	-	1793850..1794812 (-)	963	WP_002274167.1	sugar ABC transporter substrate-binding protein	-
V3C22_RS08810 (V3C22_08810)	ssbA	1795228..1795623 (-)	396	WP_002263454.1	single-stranded DNA-binding protein	Machinery gene
V3C22_RS08815 (V3C22_08815)	-	1795710..1796066 (-)	357	WP_002288489.1	rhodanese-like domain-containing protein	-
V3C22_RS08820 (V3C22_08820)	-	1796066..1796497 (-)	432	WP_080035846.1	MarR family winged helix-turn-helix transcriptional regulator	-
V3C22_RS08825 (V3C22_08825)	ytpR	1796586..1797212 (-)	627	WP_226705883.1	YtpR family tRNA-binding protein	-
V3C22_RS08830 (V3C22_08830)	-	1797209..1797538 (-)	330	WP_002285056.1	thioredoxin family protein	-
V3C22_RS08835 (V3C22_08835)	-	1797516..1797824 (-)	309	WP_002263449.1	DUF4651 domain-containing protein	-
V3C22_RS08840 (V3C22_08840)	pepA	1797884..1798951 (+)	1068	WP_002272112.1	glutamyl aminopeptidase	-
V3C22_RS08845 (V3C22_08845)	proC	1799007..1799777 (+)	771	WP_002263447.1	pyrroline-5-carboxylate reductase	-
V3C22_RS08850 (V3C22_08850)	-	1799863..1800525 (-)	663	WP_002273270.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14841.90 Da
• Isoelectric Point: 6.4855

>NTDB_id=1105968 V3C22_RS08810 WP_002263454.1 1795228..1795623(-) (ssbA) [Streptococcus mutans strain Xc]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1105968 V3C22_RS08810 WP_002263454.1 1795228..1795623(-) (ssbA) [Streptococcus mutans strain Xc]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: Q8DS68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	100	100	1
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	58.036	85.496	0.496
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405