Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | ACM67B_RS07490 | Genome accession | NZ_CP181247 |
| Coordinates | 1573533..1573820 (-) | Length | 95 a.a. |
| NCBI ID | WP_416190495.1 | Uniprot ID | - |
| Organism | Neisseria sp. CCUG17229 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1568533..1578820
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM67B_RS07465 (ACM67B_07465) | holA | 1568978..1569979 (-) | 1002 | WP_416189097.1 | DNA polymerase III subunit delta | - |
| ACM67B_RS07470 (ACM67B_07470) | lptE | 1569980..1570459 (-) | 480 | WP_416189098.1 | LPS assembly lipoprotein LptE | - |
| ACM67B_RS07475 (ACM67B_07475) | pgeF | 1570646..1571422 (-) | 777 | WP_416189099.1 | peptidoglycan editing factor PgeF | - |
| ACM67B_RS07480 (ACM67B_07480) | rluD | 1571474..1572598 (-) | 1125 | WP_416189100.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| ACM67B_RS07485 (ACM67B_07485) | comL | 1572597..1573400 (+) | 804 | WP_416189101.1 | outer membrane protein assembly factor BamD | Machinery gene |
| ACM67B_RS07490 (ACM67B_07490) | comE | 1573533..1573820 (-) | 288 | WP_416190495.1 | ComEA family DNA-binding protein | Machinery gene |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 9863.57 Da Isoelectric Point: 10.8151
>NTDB_id=1099580 ACM67B_RS07490 WP_416190495.1 1573533..1573820(-) (comE) [Neisseria sp. CCUG17229]
MKKILFTALATLAASISAAAVNINTASESELTALPGIGPAKAKAIAEYRKQHGSFKTVDELKNVKGIGEGIFSKLKNEAT
VTAPAKKAARPAVKK
MKKILFTALATLAASISAAAVNINTASESELTALPGIGPAKAKAIAEYRKQHGSFKTVDELKNVKGIGEGIFSKLKNEAT
VTAPAKKAARPAVKK
Nucleotide
Download Length: 288 bp
>NTDB_id=1099580 ACM67B_RS07490 WP_416190495.1 1573533..1573820(-) (comE) [Neisseria sp. CCUG17229]
TTGAAAAAAATCCTCTTTACCGCACTGGCTACTCTGGCCGCCTCGATATCGGCTGCAGCCGTCAATATCAATACGGCCTC
CGAAAGCGAACTGACCGCCCTGCCGGGCATCGGCCCAGCCAAAGCCAAAGCGATTGCGGAGTACCGCAAACAGCACGGCA
GCTTTAAAACGGTGGACGAATTGAAAAACGTCAAAGGCATTGGCGAGGGAATCTTCTCGAAGCTGAAGAATGAGGCTACT
GTCACTGCGCCGGCCAAGAAGGCTGCCCGGCCTGCTGTTAAGAAGTAG
TTGAAAAAAATCCTCTTTACCGCACTGGCTACTCTGGCCGCCTCGATATCGGCTGCAGCCGTCAATATCAATACGGCCTC
CGAAAGCGAACTGACCGCCCTGCCGGGCATCGGCCCAGCCAAAGCCAAAGCGATTGCGGAGTACCGCAAACAGCACGGCA
GCTTTAAAACGGTGGACGAATTGAAAAACGTCAAAGGCATTGGCGAGGGAATCTTCTCGAAGCTGAAGAATGAGGCTACT
GTCACTGCGCCGGCCAAGAAGGCTGCCCGGCCTGCTGTTAAGAAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
57.576 |
100 |
0.6 |
| comE | Neisseria gonorrhoeae MS11 |
57.576 |
100 |
0.6 |
| comE | Neisseria gonorrhoeae MS11 |
57.576 |
100 |
0.6 |
| comE | Neisseria gonorrhoeae MS11 |
57.576 |
100 |
0.6 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
54.321 |
85.263 |
0.463 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
47.368 |
80 |
0.379 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
47.368 |
80 |
0.379 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
47.368 |
80 |
0.379 |
| comEA | Staphylococcus aureus MW2 |
57.377 |
64.211 |
0.368 |
| comEA | Staphylococcus aureus N315 |
57.377 |
64.211 |
0.368 |