Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACM0O0_RS01580 | Genome accession | NZ_CP180689 |
| Coordinates | 330595..331026 (+) | Length | 143 a.a. |
| NCBI ID | WP_062850214.1 | Uniprot ID | - |
| Organism | Acinetobacter lactucae isolate nanjing | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 325595..336026
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM0O0_RS01560 | - | 326987..327874 (+) | 888 | WP_057104808.1 | metal-dependent hydrolase | - |
| ACM0O0_RS01565 | - | 328005..328595 (+) | 591 | WP_002117090.1 | LemA family protein | - |
| ACM0O0_RS01570 | - | 328617..329699 (+) | 1083 | WP_416040971.1 | TPM domain-containing protein | - |
| ACM0O0_RS01575 | - | 329693..330253 (+) | 561 | WP_416040972.1 | TPM domain-containing protein | - |
| ACM0O0_RS01580 | pilA | 330595..331026 (+) | 432 | WP_062850214.1 | pilin | Machinery gene |
| ACM0O0_RS01585 | - | 331086..332399 (+) | 1314 | WP_416040973.1 | O-antigen ligase family protein | - |
| ACM0O0_RS01590 | - | 332502..334130 (+) | 1629 | WP_416040974.1 | pilin glycosylation ligase domain-containing protein | - |
| ACM0O0_RS01595 | bfr | 334175..334639 (-) | 465 | WP_016143648.1 | heteropolymeric bacterioferritin subunit Bfr | - |
| ACM0O0_RS01600 | - | 334883..335077 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ACM0O0_RS01605 | - | 335297..335680 (-) | 384 | WP_002116996.1 | RidA family protein | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 14467.64 Da Isoelectric Point: 8.1114
>NTDB_id=1097447 ACM0O0_RS01580 WP_062850214.1 330595..331026(+) (pilA) [Acinetobacter lactucae isolate nanjing]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYSKYQAKSKLTASLSEISAGKTVAEERINNGEAVTLTDLGLQATTSNCDIA
VTGFAAGSGAGTIACTVKNAPSQVTGAVMTWTRVGATGIWTCATTGITDTNNKALAPKGCAAS
MNAQKGFTLIELMIVVAIIGILAAIAIPQYSKYQAKSKLTASLSEISAGKTVAEERINNGEAVTLTDLGLQATTSNCDIA
VTGFAAGSGAGTIACTVKNAPSQVTGAVMTWTRVGATGIWTCATTGITDTNNKALAPKGCAAS
Nucleotide
Download Length: 432 bp
>NTDB_id=1097447 ACM0O0_RS01580 WP_062850214.1 330595..331026(+) (pilA) [Acinetobacter lactucae isolate nanjing]
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCACAGTATAGTAAGTATCAAGCAAAATCTAAATTAACAGCAAGTTTGTCAGAGATTTCAGCAGGTAAAACTGTAGCAG
AAGAGCGAATTAATAATGGAGAAGCAGTTACCCTAACTGATCTTGGTCTTCAAGCAACTACATCAAATTGTGATATTGCT
GTAACTGGTTTTGCAGCTGGTAGTGGTGCGGGAACTATTGCATGTACAGTTAAAAATGCTCCTTCTCAAGTTACAGGTGC
AGTAATGACTTGGACAAGAGTTGGTGCAACTGGAATTTGGACTTGTGCCACTACAGGTATTACAGATACAAATAATAAAG
CACTTGCTCCTAAAGGATGTGCTGCATCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTAGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCACAGTATAGTAAGTATCAAGCAAAATCTAAATTAACAGCAAGTTTGTCAGAGATTTCAGCAGGTAAAACTGTAGCAG
AAGAGCGAATTAATAATGGAGAAGCAGTTACCCTAACTGATCTTGGTCTTCAAGCAACTACATCAAATTGTGATATTGCT
GTAACTGGTTTTGCAGCTGGTAGTGGTGCGGGAACTATTGCATGTACAGTTAAAAATGCTCCTTCTCAAGTTACAGGTGC
AGTAATGACTTGGACAAGAGTTGGTGCAACTGGAATTTGGACTTGTGCCACTACAGGTATTACAGATACAAATAATAAAG
CACTTGCTCCTAAAGGATGTGCTGCATCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
49.655 |
100 |
0.503 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.892 |
100 |
0.434 |
| pilA | Vibrio cholerae strain A1552 |
41.892 |
100 |
0.434 |
| pilA | Vibrio cholerae C6706 |
41.892 |
100 |
0.434 |
| comP | Acinetobacter baylyi ADP1 |
38.71 |
100 |
0.42 |
| pilA | Pseudomonas aeruginosa PAK |
38.961 |
100 |
0.42 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
46.094 |
89.51 |
0.413 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
41.844 |
98.601 |
0.413 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.806 |
100 |
0.371 |