Detailed information NTG1097156

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACL43R_RS05280
• Genome accession: NZ_CP180647
• Coordinates: 1058833..1059684 (+)
• Length: 283 a.a.
• NCBI ID: WP_416037287.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain JAL11
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1053833..1064684

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL43R_RS05260 (ACL43R_05260)	-	1054162..1054782 (+)	621	WP_416037284.1	GntR family transcriptional regulator	-
ACL43R_RS05265 (ACL43R_05265)	-	1054987..1056189 (+)	1203	WP_017370393.1	quaternary amine ABC transporter ATP-binding protein	-
ACL43R_RS05270 (ACL43R_05270)	-	1056182..1057906 (+)	1725	WP_416037285.1	ABC transporter permease/substrate binding protein	-
ACL43R_RS05275 (ACL43R_05275)	budA	1058048..1058746 (+)	699	WP_416037286.1	acetolactate decarboxylase	-
ACL43R_RS05280 (ACL43R_05280)	dprA	1058833..1059684 (+)	852	WP_416037287.1	DNA-processing protein DprA	Machinery gene
ACL43R_RS05285 (ACL43R_05285)	topA	1059891..1062041 (+)	2151	WP_416037288.1	type I DNA topoisomerase	-
ACL43R_RS05290 (ACL43R_05290)	trmFO	1062087..1063430 (+)	1344	WP_213496350.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
ACL43R_RS05295 (ACL43R_05295)	-	1063504..1063725 (-)	222	WP_416037289.1	hypothetical protein	-

Sequence

Protein

• Length: 283 a.a.
• Molecular weight: 32062.22 Da
• Isoelectric Point: 9.9870

>NTDB_id=1097156 ACL43R_RS05280 WP_416037287.1 1058833..1059684(+) (dprA) [Lactococcus formosensis strain JAL11]
MIKNFEILRLKKAGMSNLGILKLINYQERHEVKLTLRQFARIAEIKAIPNFIENYKSQDVKRLRKLYKLFPSFSILDDIY
PEWLKEIYNPPALLFYQGNLKLLNLPKLGFVGSREGSKEATKITHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLAGEQPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLD

Nucleotide

• Length: 852 bp

>NTDB_id=1097156 ACL43R_RS05280 WP_416037287.1 1058833..1059684(+) (dprA) [Lactococcus formosensis strain JAL11]
ATGATTAAAAACTTTGAAATATTACGTTTGAAAAAAGCAGGAATGTCCAATCTTGGAATTTTGAAACTGATCAACTATCA
GGAAAGGCATGAAGTAAAGCTTACTTTACGACAATTTGCACGGATTGCAGAGATTAAAGCTATCCCAAATTTTATTGAGA
ATTATAAGAGTCAGGATGTTAAACGGCTACGAAAGCTATATAAGCTCTTCCCTTCGTTCTCCATTTTAGATGATATTTAT
CCAGAATGGTTAAAAGAAATATATAATCCTCCGGCACTCCTTTTTTACCAAGGAAATCTAAAATTACTTAATCTACCTAA
ACTTGGATTTGTAGGTAGCCGTGAAGGCTCCAAAGAAGCAACCAAAATTACGCATAAGCTTATTGAGGAATTAAAACAAA
ACTTTGTTATTGTGAGCGGCTTGGCACGCGGTGTTGACACTTCTAGCCATGTAGCGGCTGTAAAGCAAAAAACTCCAACT
ATTGCTGTCATAGGTAATGGTTTAGATATTTCTTATCCAAAAGAAAATCGTAAATTACAAGAATATTTAGCAACACACGA
ATTAGTTTTATCAGAGTACCTTGCAGGAGAGCAACCGCTCAAGTTTCATTTCCCAGAGAGGAATAGAATCATTGCTGGAC
TTTCACGTGGGATTGTCGTTGTTGAAGCAAAACAACGTAGTGGAAGTCTCATTACAAGTCGATATGCATTAGAAGGGAAT
AGAGAGGTATTCGCTGTACCTGGAGATATTTTGAATCGAAATGCCTCAGGCTGTAATCAATTAATTCAACAGGGAGCTGC
TAAGCTTGTCACACACGGTCAAGATATTTTAGACGAATTTTATTTAGATTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.929	98.94	0.633
dprA	Streptococcus mutans UA159	56.631	98.587	0.558
dprA/cilB/dalA	Streptococcus pneumoniae D39	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus pneumoniae R6	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus mitis SK321	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	54.48	98.587	0.537
dprA	Haemophilus influenzae Rd KW20	39.781	96.82	0.385
dprA	Latilactobacillus sakei subsp. sakei 23K	37.153	100	0.378
dprA	Staphylococcus aureus N315	38.931	92.58	0.36