Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACM0CY_RS17020 | Genome accession | NZ_CP180570 |
| Coordinates | 3694652..3694969 (+) | Length | 105 a.a. |
| NCBI ID | WP_043156043.1 | Uniprot ID | A0A3S5Z5K4 |
| Organism | Aeromonas caviae strain BJ093 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3689652..3699969
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM0CY_RS16995 | trhA | 3690346..3690978 (-) | 633 | WP_039041319.1 | PAQR family membrane homeostasis protein TrhA | - |
| ACM0CY_RS17000 | - | 3691170..3692675 (+) | 1506 | WP_415870329.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| ACM0CY_RS17005 | - | 3692781..3693332 (+) | 552 | WP_045521880.1 | septation protein A | - |
| ACM0CY_RS17010 | - | 3693357..3693653 (+) | 297 | WP_010675539.1 | YciI family protein | - |
| ACM0CY_RS17015 | cysQ | 3693717..3694487 (-) | 771 | WP_039041322.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| ACM0CY_RS17020 | comEA | 3694652..3694969 (+) | 318 | WP_043156043.1 | ComEA family DNA-binding protein | Machinery gene |
| ACM0CY_RS17025 | galU | 3695064..3695975 (+) | 912 | WP_010675542.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACM0CY_RS17030 | - | 3696189..3697586 (+) | 1398 | WP_052815577.1 | peptide MFS transporter | - |
| ACM0CY_RS17035 | - | 3697657..3698628 (-) | 972 | WP_029314797.1 | response regulator | - |
| ACM0CY_RS17040 | - | 3698904..3699578 (+) | 675 | WP_039041329.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11006.90 Da Isoelectric Point: 10.1059
>NTDB_id=1096709 ACM0CY_RS17020 WP_043156043.1 3694652..3694969(+) (comEA) [Aeromonas caviae strain BJ093]
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASASELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASASELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=1096709 ACM0CY_RS17020 WP_043156043.1 3694652..3694969(+) (comEA) [Aeromonas caviae strain BJ093]
ATGAACAAGAAGACCCTGATCGCCGCACTACTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAAAGCGGCAAGATCAATCTCAATACCGCCAGTGCCAGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAGACCCTGATCGCCGCACTACTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAAAGCGGCAAGATCAATCTCAATACCGCCAGTGCCAGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.486 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.946 |
100 |
0.486 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |
| comEA | Acinetobacter baylyi ADP1 |
46.914 |
77.143 |
0.362 |