Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACKWD1_RS22990 | Genome accession | NZ_CP177201 |
| Coordinates | 4847429..4847746 (-) | Length | 105 a.a. |
| NCBI ID | WP_043156043.1 | Uniprot ID | A0A3S5Z5K4 |
| Organism | Aeromonas caviae strain QZ63 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4842429..4852746
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKWD1_RS22970 (ACKWD1_22970) | - | 4842820..4843494 (-) | 675 | WP_161470299.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| ACKWD1_RS22975 (ACKWD1_22975) | - | 4843770..4844741 (+) | 972 | WP_029314797.1 | response regulator | - |
| ACKWD1_RS22980 (ACKWD1_22980) | - | 4844812..4846209 (-) | 1398 | WP_411953028.1 | peptide MFS transporter | - |
| ACKWD1_RS22985 (ACKWD1_22985) | galU | 4846423..4847334 (-) | 912 | WP_010675542.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACKWD1_RS22990 (ACKWD1_22990) | comEA | 4847429..4847746 (-) | 318 | WP_043156043.1 | ComEA family DNA-binding protein | Machinery gene |
| ACKWD1_RS22995 (ACKWD1_22995) | cysQ | 4847911..4848681 (+) | 771 | WP_039041322.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| ACKWD1_RS23000 (ACKWD1_23000) | - | 4848745..4849041 (-) | 297 | WP_010675539.1 | YciI family protein | - |
| ACKWD1_RS23005 (ACKWD1_23005) | - | 4849066..4849617 (-) | 552 | WP_039041321.1 | septation protein A | - |
| ACKWD1_RS23010 (ACKWD1_23010) | - | 4849723..4851228 (-) | 1506 | WP_201985835.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| ACKWD1_RS23015 (ACKWD1_23015) | trhA | 4851420..4852052 (+) | 633 | WP_041212406.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11006.90 Da Isoelectric Point: 10.1059
>NTDB_id=1086151 ACKWD1_RS22990 WP_043156043.1 4847429..4847746(-) (comEA) [Aeromonas caviae strain QZ63]
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASASELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASASELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=1086151 ACKWD1_RS22990 WP_043156043.1 4847429..4847746(-) (comEA) [Aeromonas caviae strain QZ63]
ATGAACAAGAAGACCCTGATCGCCGCACTACTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAAAGCGGCAAGATCAATCTCAATACCGCCAGTGCCAGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAGACCCTGATCGCCGCACTACTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAAAGCGGCAAGATCAATCTCAATACCGCCAGTGCCAGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.486 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.946 |
100 |
0.486 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |
| comEA | Acinetobacter baylyi ADP1 |
46.914 |
77.143 |
0.362 |