Detailed information NTG0107228

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AAA995_RS09815
• Genome accession: NZ_AP028877
• Coordinates: 1898594..1899028 (-)
• Length: 144 a.a.
• NCBI ID: WP_033606693.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 21P20
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1893594..1904028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA995_RS09775 (SP21P20_19120)	rnpA	1894011..1894382 (-)	372	WP_000739246.1	ribonuclease P protein component	-
AAA995_RS09780	-	1894399..1894530 (-)	132	WP_000768904.1	hypothetical protein	-
AAA995_RS09785 (SP21P20_19130)	-	1894531..1895721 (-)	1191	WP_000167765.1	acetate kinase	-
AAA995_RS09790 (SP21P20_19140)	comYH	1895772..1896725 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
AAA995_RS09795	-	1896786..1897378 (-)	593	Protein_1904	methyltransferase domain-containing protein	-
AAA995_RS09800 (SP21P20_19170)	comGG/cglG	1897481..1897927 (-)	447	WP_001809944.1	competence type IV pilus minor pilin ComGG	Machinery gene
AAA995_RS09805 (SP21P20_19180)	comGF/cglF	1897905..1898366 (-)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
AAA995_RS09810 (SP21P20_19190)	comGE/cglE	1898329..1898631 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
AAA995_RS09815 (SP21P20_19200)	comGD/cglD	1898594..1899028 (-)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
AAA995_RS09820 (SP21P20_19210)	comGC/cglC	1898991..1899314 (-)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
AAA995_RS09825 (SP21P20_19220)	comGB/cglB	1899316..1900332 (-)	1017	WP_078130737.1	competence type IV pilus assembly protein ComGB	Machinery gene
AAA995_RS09830 (SP21P20_19230)	comGA/cglA/cilD	1900280..1901221 (-)	942	WP_338173922.1	competence type IV pilus ATPase ComGA	Machinery gene
AAA995_RS09835 (SP21P20_19240)	-	1901297..1901662 (-)	366	WP_000286415.1	DUF1033 family protein	-
AAA995_RS09840 (SP21P20_19250)	-	1901813..1902871 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15802.39 Da
• Isoelectric Point: 10.5150

>NTDB_id=107228 AAA995_RS09815 WP_033606693.1 1898594..1899028(-) (comGD/cglD) [Streptococcus pneumoniae strain 21P20]
MINKILVKSLKIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQM
ISNGSQKLPVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=107228 AAA995_RS09815 WP_033606693.1 1898594..1899028(-) (comGD/cglD) [Streptococcus pneumoniae strain 21P20]
ATGATAAACAAAATACTAGTCAAATCGTTAAAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGCTCTGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATG
ATTAGCAATGGCAGTCAAAAGTTGCCAGTCCCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae D39	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae R6	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae TIGR4	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	56.835	96.528	0.549
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444