Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | AAA995_RS09810 | Genome accession | NZ_AP028877 |
| Coordinates | 1898329..1898631 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413382.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain 21P20 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1893329..1903631
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAA995_RS09775 (SP21P20_19120) | rnpA | 1894011..1894382 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| AAA995_RS09780 | - | 1894399..1894530 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| AAA995_RS09785 (SP21P20_19130) | - | 1894531..1895721 (-) | 1191 | WP_000167765.1 | acetate kinase | - |
| AAA995_RS09790 (SP21P20_19140) | comYH | 1895772..1896725 (-) | 954 | WP_000345126.1 | class I SAM-dependent methyltransferase | Machinery gene |
| AAA995_RS09795 | - | 1896786..1897378 (-) | 593 | Protein_1904 | methyltransferase domain-containing protein | - |
| AAA995_RS09800 (SP21P20_19170) | comGG/cglG | 1897481..1897927 (-) | 447 | WP_001809944.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| AAA995_RS09805 (SP21P20_19180) | comGF/cglF | 1897905..1898366 (-) | 462 | WP_000250531.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AAA995_RS09810 (SP21P20_19190) | comGE/cglE | 1898329..1898631 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AAA995_RS09815 (SP21P20_19200) | comGD/cglD | 1898594..1899028 (-) | 435 | WP_033606693.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AAA995_RS09820 (SP21P20_19210) | comGC/cglC | 1898991..1899314 (-) | 324 | WP_000738628.1 | comG operon protein ComGC | Machinery gene |
| AAA995_RS09825 (SP21P20_19220) | comGB/cglB | 1899316..1900332 (-) | 1017 | WP_078130737.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AAA995_RS09830 (SP21P20_19230) | comGA/cglA/cilD | 1900280..1901221 (-) | 942 | WP_338173922.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AAA995_RS09835 (SP21P20_19240) | - | 1901297..1901662 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| AAA995_RS09840 (SP21P20_19250) | - | 1901813..1902871 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11108.08 Da Isoelectric Point: 9.7273
>NTDB_id=107227 AAA995_RS09810 WP_000413382.1 1898329..1898631(-) (comGE/cglE) [Streptococcus pneumoniae strain 21P20]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=107227 AAA995_RS09810 WP_000413382.1 1898329..1898631(-) (comGE/cglE) [Streptococcus pneumoniae strain 21P20]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCTTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
98 |
100 |
0.98 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |