Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACI3L8_RS02665 | Genome accession | NZ_CP173391 |
| Coordinates | 613755..614042 (-) | Length | 95 a.a. |
| NCBI ID | WP_103410106.1 | Uniprot ID | - |
| Organism | Vibrio campbellii strain LB3 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 608755..619042
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L8_RS02640 (ACI3L8_02640) | - | 609196..610410 (+) | 1215 | WP_029788618.1 | pyridoxal phosphate-dependent aminotransferase | - |
| ACI3L8_RS02645 (ACI3L8_02645) | yfbR | 610494..611078 (+) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| ACI3L8_RS02650 (ACI3L8_02650) | - | 611082..612416 (+) | 1335 | WP_045455046.1 | anti-phage deoxyguanosine triphosphatase | - |
| ACI3L8_RS02655 (ACI3L8_02655) | - | 612437..613054 (-) | 618 | WP_404969498.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| ACI3L8_RS02660 (ACI3L8_02660) | rrtA | 613058..613609 (+) | 552 | WP_045377767.1 | rhombosortase | - |
| ACI3L8_RS02665 (ACI3L8_02665) | comEA | 613755..614042 (-) | 288 | WP_103410106.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| ACI3L8_RS02670 (ACI3L8_02670) | ppiD | 614188..616047 (-) | 1860 | WP_038890556.1 | peptidylprolyl isomerase | - |
| ACI3L8_RS02675 (ACI3L8_02675) | - | 616262..616534 (-) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10564.27 Da Isoelectric Point: 5.8692
>NTDB_id=1072001 ACI3L8_RS02665 WP_103410106.1 613755..614042(-) (comEA) [Vibrio campbellii strain LB3]
MKWMLTLCLLILTPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
MKWMLTLCLLILTPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
Nucleotide
Download Length: 288 bp
>NTDB_id=1072001 ACI3L8_RS02665 WP_103410106.1 613755..614042(-) (comEA) [Vibrio campbellii strain LB3]
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCACGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACTAAGGTGAAAGGC
ATCGGTGAGGCGACTGTGAAGAAGAACGAAGACCGCATCCTGCTGTAA
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCACGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACTAAGGTGAAAGGC
ATCGGTGAGGCGACTGTGAAGAAGAACGAAGACCGCATCCTGCTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
95.789 |
100 |
0.958 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
78.947 |
100 |
0.789 |
| comEA | Vibrio cholerae C6706 |
59.574 |
98.947 |
0.589 |
| comEA | Vibrio cholerae strain A1552 |
59.574 |
98.947 |
0.589 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.463 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comEA | Acinetobacter baylyi ADP1 |
48.649 |
77.895 |
0.379 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.263 |
0.368 |