Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACI3L5_RS05540 | Genome accession | NZ_CP173389 |
| Coordinates | 1179783..1180070 (+) | Length | 95 a.a. |
| NCBI ID | WP_005425566.1 | Uniprot ID | A0A812FIP9 |
| Organism | Vibrio campbellii strain LB10 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1174783..1185070
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L5_RS05530 (ACI3L5_05530) | - | 1177291..1177563 (+) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
| ACI3L5_RS05535 (ACI3L5_05535) | ppiD | 1177778..1179637 (+) | 1860 | WP_038890556.1 | peptidylprolyl isomerase | - |
| ACI3L5_RS05540 (ACI3L5_05540) | comEA | 1179783..1180070 (+) | 288 | WP_005425566.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| ACI3L5_RS05545 (ACI3L5_05545) | rrtA | 1180215..1180766 (-) | 552 | WP_045377767.1 | rhombosortase | - |
| ACI3L5_RS05550 (ACI3L5_05550) | - | 1180770..1181387 (+) | 618 | WP_045370542.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| ACI3L5_RS05555 (ACI3L5_05555) | - | 1181408..1182742 (-) | 1335 | WP_404973666.1 | anti-phage deoxyguanosine triphosphatase | - |
| ACI3L5_RS05560 (ACI3L5_05560) | yfbR | 1182746..1183330 (-) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| ACI3L5_RS05565 (ACI3L5_05565) | - | 1183414..1184628 (-) | 1215 | WP_029788618.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10534.24 Da Isoelectric Point: 5.8692
>NTDB_id=1071959 ACI3L5_RS05540 WP_005425566.1 1179783..1180070(+) (comEA) [Vibrio campbellii strain LB10]
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
Nucleotide
Download Length: 288 bp
>NTDB_id=1071959 ACI3L5_RS05540 WP_005425566.1 1179783..1180070(+) (comEA) [Vibrio campbellii strain LB10]
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACTAAGGTGAAAGGC
ATCGGTGAGGCGACTGTGAAGAAGAACGAAGACCGCATCCTGCTGTAA
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACTAAGGTGAAAGGC
ATCGGTGAGGCGACTGTGAAGAAGAACGAAGACCGCATCCTGCTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
96.842 |
100 |
0.968 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
80 |
100 |
0.8 |
| comEA | Vibrio cholerae C6706 |
58.333 |
100 |
0.589 |
| comEA | Vibrio cholerae strain A1552 |
58.333 |
100 |
0.589 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.463 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comEA | Acinetobacter baylyi ADP1 |
48.649 |
77.895 |
0.379 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.263 |
0.368 |