Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACHZDB_RS15055 | Genome accession | NZ_CP172405 |
| Coordinates | 3286228..3286515 (+) | Length | 95 a.a. |
| NCBI ID | WP_005425566.1 | Uniprot ID | A0A812FIP9 |
| Organism | Vibrio campbellii strain LB503 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3281228..3291515
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACHZDB_RS15045 (ACHZDB_15045) | - | 3283736..3284008 (+) | 273 | WP_005430934.1 | HU family DNA-binding protein | - |
| ACHZDB_RS15050 (ACHZDB_15050) | ppiD | 3284223..3286082 (+) | 1860 | WP_045377764.1 | peptidylprolyl isomerase | - |
| ACHZDB_RS15055 (ACHZDB_15055) | comEA | 3286228..3286515 (+) | 288 | WP_005425566.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| ACHZDB_RS15060 (ACHZDB_15060) | rrtA | 3286661..3287212 (-) | 552 | WP_045377767.1 | rhombosortase | - |
| ACHZDB_RS15065 (ACHZDB_15065) | - | 3287216..3287833 (+) | 618 | WP_050909287.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| ACHZDB_RS15070 (ACHZDB_15070) | - | 3287854..3289188 (-) | 1335 | WP_399425164.1 | anti-phage deoxyguanosine triphosphatase | - |
| ACHZDB_RS15075 (ACHZDB_15075) | yfbR | 3289192..3289776 (-) | 585 | WP_005425568.1 | 5'-deoxynucleotidase | - |
| ACHZDB_RS15080 (ACHZDB_15080) | - | 3289860..3291074 (-) | 1215 | WP_029788618.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10534.24 Da Isoelectric Point: 5.8692
>NTDB_id=1067462 ACHZDB_RS15055 WP_005425566.1 3286228..3286515(+) (comEA) [Vibrio campbellii strain LB503]
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
MKWMLTLCLLILAPMSWAETKTKADKYEGIEITVNVNSATAEEIATLLNGIGEKKAQDIVEYRNEHGPFKTAADLTKVKG
IGEATVKKNEDRILL
Nucleotide
Download Length: 288 bp
>NTDB_id=1067462 ACHZDB_RS15055 WP_005425566.1 3286228..3286515(+) (comEA) [Vibrio campbellii strain LB503]
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACTAAGGTGAAAGGC
ATCGGTGAGGCGACTGTGAAGAAGAACGAAGACCGCATCCTGCTGTAA
ATGAAATGGATGTTAACGCTGTGCTTATTGATACTCGCGCCGATGAGCTGGGCGGAAACAAAGACTAAAGCAGATAAGTA
TGAAGGTATTGAGATTACGGTTAACGTTAACTCTGCCACTGCAGAAGAGATTGCGACGCTACTTAATGGTATTGGTGAGA
AGAAAGCGCAAGATATTGTTGAGTATCGCAACGAGCACGGTCCATTTAAAACAGCTGCGGATCTTACTAAGGTGAAAGGC
ATCGGTGAGGCGACTGTGAAGAAGAACGAAGACCGCATCCTGCTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
96.842 |
100 |
0.968 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
80 |
100 |
0.8 |
| comEA | Vibrio cholerae C6706 |
58.333 |
100 |
0.589 |
| comEA | Vibrio cholerae strain A1552 |
58.333 |
100 |
0.589 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.463 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comE | Neisseria gonorrhoeae MS11 |
39.785 |
97.895 |
0.389 |
| comEA | Acinetobacter baylyi ADP1 |
48.649 |
77.895 |
0.379 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.263 |
0.368 |