Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACHWYG_RS05470 | Genome accession | NZ_CP172082 |
| Coordinates | 1121836..1122276 (-) | Length | 146 a.a. |
| NCBI ID | WP_032823893.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain GA54827 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1116836..1127276
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACHWYG_RS05450 | rho | 1117225..1118487 (+) | 1263 | WP_005666690.1 | transcription termination factor Rho | - |
| ACHWYG_RS05455 | pilD | 1118542..1119234 (-) | 693 | WP_032823889.1 | A24 family peptidase | Machinery gene |
| ACHWYG_RS05460 | pilC | 1119231..1120451 (-) | 1221 | WP_032823890.1 | type II secretion system F family protein | Machinery gene |
| ACHWYG_RS05465 | pilB | 1120448..1121839 (-) | 1392 | WP_032823891.1 | GspE/PulE family protein | Machinery gene |
| ACHWYG_RS05470 | pilA | 1121836..1122276 (-) | 441 | WP_032823893.1 | prepilin peptidase-dependent pilin | Machinery gene |
| ACHWYG_RS05475 | ampD | 1122391..1122951 (+) | 561 | WP_005648974.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| ACHWYG_RS05480 | corC | 1123574..1124473 (+) | 900 | WP_032823895.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| ACHWYG_RS05485 | lnt | 1124496..1126013 (+) | 1518 | WP_080279450.1 | apolipoprotein N-acyltransferase | - |
| ACHWYG_RS05490 | rsmE | 1126063..1126800 (+) | 738 | WP_112103475.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15077.31 Da Isoelectric Point: 8.4607
>NTDB_id=1065014 ACHWYG_RS05470 WP_032823893.1 1121836..1122276(-) (pilA) [Haemophilus influenzae strain GA54827]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKSDVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVEGNGTLGGMSYTLTAEGDSAKGVTWKTTCGTTNADIFPAGFCSK
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKSDVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVKSVTTSNGAITVEGNGTLGGMSYTLTAEGDSAKGVTWKTTCGTTNADIFPAGFCSK
Nucleotide
Download Length: 441 bp
>NTDB_id=1065014 ACHWYG_RS05470 WP_032823893.1 1121836..1122276(-) (pilA) [Haemophilus influenzae strain GA54827]
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCCTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCTC
CTTATAAGTCAGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGAGGGTAATGGTAC
ATTAGGTGGAATGAGTTACACGCTCACAGCTGAAGGCGATAGTGCAAAAGGCGTTACATGGAAAACCACCTGTGGCACAA
CGAATGCCGATATTTTCCCTGCTGGATTCTGTTCAAAATGA
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGTTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCCTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCTC
CTTATAAGTCAGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAAAATCAGTGACAACAAGCAACGGTGCAATAACAGTAGAGGGTAATGGTAC
ATTAGGTGGAATGAGTTACACGCTCACAGCTGAAGGCGATAGTGCAAAAGGCGTTACATGGAAAACCACCTGTGGCACAA
CGAATGCCGATATTTTCCCTGCTGGATTCTGTTCAAAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
81.944 |
98.63 |
0.808 |
| pilA | Haemophilus influenzae Rd KW20 |
77.778 |
98.63 |
0.767 |
| pilA | Glaesserella parasuis strain SC1401 |
54.73 |
100 |
0.555 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.096 |
100 |
0.411 |
| pilA2 | Legionella pneumophila str. Paris |
41.096 |
100 |
0.411 |
| comP | Acinetobacter baylyi ADP1 |
41.379 |
99.315 |
0.411 |
| pilA | Vibrio campbellii strain DS40M4 |
39.726 |
100 |
0.397 |