Detailed information NTG0105842

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AAA982_RS09595
• Genome accession: NZ_AP028601
• Coordinates: 1849293..1849697 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588030.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PF1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1844293..1854697

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAA982_RS09555 (TKY113292_18600)	rnpA	1844708..1845079 (-)	372	WP_000739246.1	ribonuclease P protein component	-
AAA982_RS09560	-	1845096..1845227 (-)	132	WP_000768904.1	hypothetical protein	-
AAA982_RS09565 (TKY113292_18610)	-	1845228..1846418 (-)	1191	WP_050085692.1	acetate kinase	-
AAA982_RS09570 (TKY113292_18620)	comYH	1846469..1847422 (-)	954	WP_044813830.1	class I SAM-dependent methyltransferase	Machinery gene
AAA982_RS09575	-	1847483..1848077 (-)	595	Protein_1860	methyltransferase domain-containing protein	-
AAA982_RS09580 (TKY113292_18650)	comGG/cglG	1848180..1848626 (-)	447	WP_001811371.1	competence type IV pilus minor pilin ComGG	Machinery gene
AAA982_RS09585	comGF/cglF	1848604..1849065 (-)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
AAA982_RS09590 (TKY113292_18670)	comGE/cglE	1849028..1849330 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
AAA982_RS09595 (TKY113292_18680)	comGD/cglD	1849293..1849697 (-)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
AAA982_RS09600 (TKY113292_18690)	comGC/cglC	1849690..1850016 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
AAA982_RS09605 (TKY113292_18700)	comGB/cglB	1850018..1851034 (-)	1017	WP_138028521.1	competence type IV pilus assembly protein ComGB	Machinery gene
AAA982_RS09610 (TKY113292_18710)	comGA/cglA/cilD	1850982..1851923 (-)	942	WP_016398028.1	competence type IV pilus ATPase ComGA	Machinery gene
AAA982_RS09615 (TKY113292_18720)	-	1851999..1852364 (-)	366	WP_000286415.1	DUF1033 family protein	-
AAA982_RS09620 (TKY113292_18730)	-	1852515..1853573 (-)	1059	WP_000649473.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=105842 AAA982_RS09595 WP_000588030.1 1849293..1849697(-) (comGD/cglD) [Streptococcus pneumoniae strain PF1]
MIKAFTMLESLLVLGLVSILALGLSSSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=105842 AAA982_RS09595 WP_000588030.1 1849293..1849697(-) (comGD/cglD) [Streptococcus pneumoniae strain PF1]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCAGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463