Detailed information NTG1055490

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACFDAU_RS00550
• Genome accession: NZ_CP170197
• Coordinates: 109663..110733 (-)
• Length: 356 a.a.
• NCBI ID: WP_413438098.1
• Uniprot ID: -
• Organism: Sulfuriferula sp. GW1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 104663..115733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFDAU_RS00540 (ACFDAU_00540)	topA	106656..109169 (-)	2514	WP_413438096.1	type I DNA topoisomerase	-
ACFDAU_RS00545 (ACFDAU_00545)	-	109194..109655 (-)	462	WP_413438097.1	DUF494 family protein	-
ACFDAU_RS00550 (ACFDAU_00550)	dprA	109663..110733 (-)	1071	WP_413438098.1	DNA-processing protein DprA	Machinery gene
ACFDAU_RS00555 (ACFDAU_00555)	-	110730..111737 (-)	1008	WP_413438099.1	LysM peptidoglycan-binding domain-containing protein	-
ACFDAU_RS00560 (ACFDAU_00560)	def	111903..112406 (+)	504	WP_413438100.1	peptide deformylase	-
ACFDAU_RS00565 (ACFDAU_00565)	fmt	112429..113355 (+)	927	WP_413438101.1	methionyl-tRNA formyltransferase	-
ACFDAU_RS00570 (ACFDAU_00570)	htpX	113419..114273 (+)	855	WP_413438102.1	zinc metalloprotease HtpX	-
ACFDAU_RS00575 (ACFDAU_00575)	-	114330..114788 (-)	459	WP_413438103.1	DUF4426 domain-containing protein	-
ACFDAU_RS00580 (ACFDAU_00580)	-	114851..115486 (-)	636	WP_413438104.1	ABC-type transport auxiliary lipoprotein family protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 36949.39 Da
• Isoelectric Point: 6.2974

>NTDB_id=1055490 ACFDAU_RS00550 WP_413438098.1 109663..110733(-) (dprA) [Sulfuriferula sp. GW1]
MNRAERCAWLGLAHTRGLGGQTFRALLAAFGGPEQIYAASGSALKPYLSQPVIQRLSAGVDDAAIELALRWLDEPGNHLV
TLADSDYPSRLLEIPDPPPLLYLKGRRELLGAPMLAIVGSRNATPQGASNAEAFARALSQAGLSIVSGLALGIDAAAHRG
GLAGAASSLAVVGTGLDIVYPARNKALAHQLAGGGALLSEFPIGTPSIAANFPRRNRIISGLSLGCLVVEAALQSGSLIT
ARLAAEQGREVFAIPGSIHSPVAHGCHALIKQGAKLVESAQDVLDELHWQATILPLAADATGDDPLLSALGFEPVSLDVL
AERCGLTPDRLSAMLLERELQGSVSTLPGGFYQRIV

Nucleotide

• Length: 1071 bp

>NTDB_id=1055490 ACFDAU_RS00550 WP_413438098.1 109663..110733(-) (dprA) [Sulfuriferula sp. GW1]
TTGAACCGGGCTGAACGCTGCGCCTGGCTGGGTCTGGCGCACACACGCGGGCTGGGCGGGCAAACCTTCCGGGCTTTGCT
GGCCGCATTTGGCGGCCCGGAGCAAATCTACGCTGCTTCTGGCAGCGCCCTGAAACCCTATCTTTCCCAGCCGGTTATCC
AACGCCTATCTGCCGGCGTGGATGACGCAGCAATCGAGCTGGCTCTGCGCTGGCTTGATGAGCCCGGCAATCATCTGGTT
ACCCTGGCAGACAGCGACTATCCGTCGCGTCTTCTGGAAATCCCCGATCCTCCACCATTGTTGTACCTGAAAGGCCGCCG
CGAATTGCTCGGCGCACCGATGCTCGCCATTGTCGGGAGCCGCAATGCCACGCCTCAGGGCGCATCCAATGCCGAAGCTT
TCGCGAGAGCGTTATCGCAAGCCGGGCTTTCCATCGTCAGCGGCCTGGCGTTGGGCATTGATGCTGCTGCGCATCGCGGG
GGGCTGGCCGGCGCGGCAAGCAGCCTGGCGGTAGTCGGTACCGGACTGGATATCGTTTATCCGGCCCGCAACAAGGCGCT
GGCCCATCAACTTGCCGGGGGCGGAGCGCTGCTCTCGGAATTCCCCATCGGCACCCCCTCCATTGCCGCCAATTTTCCTC
GCCGCAATCGAATTATCAGTGGCTTAAGTCTGGGTTGTCTGGTGGTGGAAGCGGCTTTGCAAAGCGGCTCGCTCATTACA
GCAAGGCTGGCGGCTGAACAAGGCAGAGAAGTTTTTGCCATCCCCGGTTCGATCCATTCACCCGTGGCGCACGGGTGCCA
CGCACTGATTAAACAAGGCGCAAAACTGGTCGAATCGGCGCAGGATGTGCTCGATGAATTGCACTGGCAGGCTACCATTC
TCCCTCTTGCCGCTGACGCTACAGGGGATGATCCCTTGCTGTCTGCGCTGGGTTTTGAACCCGTCAGCCTGGATGTGCTG
GCCGAACGCTGCGGGTTGACGCCCGATAGGCTTTCCGCCATGCTGTTGGAAAGGGAGCTACAGGGGAGTGTCTCCACACT
CCCCGGTGGTTTCTACCAACGTATTGTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-278)

• DprA winged helix domain (DprA_WH) (295-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria meningitidis strain C311	43.073	100	0.48
dprA	Neisseria meningitidis MC58	43.073	100	0.48
dprA	Neisseria gonorrhoeae strain FA1090	41.985	100	0.463
dprA	Neisseria gonorrhoeae MS11	41.73	100	0.461
dprA	Vibrio cholerae strain A1552	42.4	100	0.447
dprA	Vibrio campbellii strain DS40M4	43.132	100	0.441
dprA	Legionella pneumophila strain ERS1305867	51.475	85.674	0.441
dprA	Acinetobacter baylyi ADP1	44.337	86.798	0.385
dprA	Glaesserella parasuis strain SC1401	43.73	87.36	0.382
dprA	Haemophilus influenzae Rd KW20	46.786	78.652	0.368