Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | ACEWY2_RS06600 | Genome accession | NZ_CP169267 |
| Coordinates | 1296636..1296947 (+) | Length | 103 a.a. |
| NCBI ID | WP_000472256.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain CBC240 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1291636..1301947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEWY2_RS06570 (ACEWY2_06570) | - | 1292419..1292622 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| ACEWY2_RS06575 (ACEWY2_06575) | - | 1292619..1293605 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| ACEWY2_RS06580 (ACEWY2_06580) | - | 1293605..1293934 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACEWY2_RS06585 (ACEWY2_06585) | - | 1293931..1294554 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ACEWY2_RS06590 (ACEWY2_06590) | comGA | 1294606..1295580 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACEWY2_RS06595 (ACEWY2_06595) | comGB | 1295552..1296622 (+) | 1071 | Protein_1261 | competence type IV pilus assembly protein ComGB | - |
| ACEWY2_RS06600 (ACEWY2_06600) | comGC | 1296636..1296947 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACEWY2_RS06605 (ACEWY2_06605) | comGD | 1296925..1297371 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACEWY2_RS06610 (ACEWY2_06610) | comGE | 1297358..1297657 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ACEWY2_RS06615 (ACEWY2_06615) | comGF | 1297575..1298072 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACEWY2_RS06620 (ACEWY2_06620) | - | 1298169..1298315 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACEWY2_RS06625 (ACEWY2_06625) | - | 1298305..1298829 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| ACEWY2_RS06630 (ACEWY2_06630) | gcvT | 1298988..1300079 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACEWY2_RS06635 (ACEWY2_06635) | gcvPA | 1300099..1301445 (+) | 1347 | WP_048665334.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11315.36 Da Isoelectric Point: 8.5268
>NTDB_id=1050160 ACEWY2_RS06600 WP_000472256.1 1296636..1296947(+) (comGC) [Staphylococcus aureus strain CBC240]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=1050160 ACEWY2_RS06600 WP_000472256.1 1296636..1296947(+) (comGC) [Staphylococcus aureus strain CBC240]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae R6 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis SK321 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |