Detailed information NTG1044342

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ACEPOU_RS04990
• Genome accession: NZ_CP168498
• Coordinates: 932547..932858 (+)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain J22
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 927547..937858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEPOU_RS04960 (ACEPOU_04960)	-	928330..928533 (+)	204	WP_000087561.1	YqgQ family protein	-
ACEPOU_RS04965 (ACEPOU_04965)	-	928530..929516 (+)	987	WP_000161315.1	ROK family glucokinase	-
ACEPOU_RS04970 (ACEPOU_04970)	-	929516..929845 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACEPOU_RS04975 (ACEPOU_04975)	-	929842..930465 (+)	624	WP_001223006.1	MBL fold metallo-hydrolase	-
ACEPOU_RS04980 (ACEPOU_04980)	comGA	930517..931491 (+)	975	WP_000697215.1	competence type IV pilus ATPase ComGA	Machinery gene
ACEPOU_RS04985 (ACEPOU_04985)	comGB	931463..932533 (+)	1071	WP_000776403.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACEPOU_RS04990 (ACEPOU_04990)	comGC	932547..932858 (+)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ACEPOU_RS04995 (ACEPOU_04995)	comGD	932836..933282 (+)	447	WP_075583651.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACEPOU_RS05000 (ACEPOU_05000)	comGE	933269..933568 (+)	300	WP_217654599.1	competence protein ComGE	Machinery gene
ACEPOU_RS05005 (ACEPOU_05005)	comGF	933486..933983 (+)	498	WP_029697681.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACEPOU_RS05010 (ACEPOU_05010)	-	934080..934226 (+)	147	WP_001789879.1	hypothetical protein	-
ACEPOU_RS05015 (ACEPOU_05015)	-	934216..934740 (+)	525	WP_001015122.1	shikimate kinase	-
ACEPOU_RS05020 (ACEPOU_05020)	gcvT	934899..935990 (+)	1092	WP_000093355.1	glycine cleavage system aminomethyltransferase GcvT	-
ACEPOU_RS05025 (ACEPOU_05025)	gcvPA	936010..937356 (+)	1347	WP_000019688.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=1044342 ACEPOU_RS04990 WP_000472256.1 932547..932858(+) (comGC) [Staphylococcus aureus strain J22]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=1044342 ACEPOU_RS04990 WP_000472256.1 932547..932858(+) (comGC) [Staphylococcus aureus strain J22]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCCCAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369