Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACEN3H_RS01725 | Genome accession | NZ_CP168231 |
| Coordinates | 365416..365880 (+) | Length | 154 a.a. |
| NCBI ID | WP_373358441.1 | Uniprot ID | - |
| Organism | Acinetobacter lactucae strain 2024CK-01095 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 360416..370880
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEN3H_RS01705 (ACEN3H_01705) | - | 361807..362694 (+) | 888 | WP_125698039.1 | metal-dependent hydrolase | - |
| ACEN3H_RS01710 (ACEN3H_01710) | - | 362825..363415 (+) | 591 | WP_002117090.1 | LemA family protein | - |
| ACEN3H_RS01715 (ACEN3H_01715) | - | 363437..364519 (+) | 1083 | WP_373358440.1 | YgcG family protein | - |
| ACEN3H_RS01720 (ACEN3H_01720) | - | 364513..365073 (+) | 561 | WP_031949503.1 | TPM domain-containing protein | - |
| ACEN3H_RS01725 (ACEN3H_01725) | pilA | 365416..365880 (+) | 465 | WP_373358441.1 | pilin | Machinery gene |
| ACEN3H_RS01730 (ACEN3H_01730) | - | 366054..367682 (+) | 1629 | WP_373358442.1 | pilin glycosylation ligase domain-containing protein | - |
| ACEN3H_RS01735 (ACEN3H_01735) | bfr | 367727..368191 (-) | 465 | WP_016143648.1 | bacterioferritin | - |
| ACEN3H_RS01740 (ACEN3H_01740) | - | 368435..368629 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ACEN3H_RS01745 (ACEN3H_01745) | - | 368850..369233 (-) | 384 | WP_002116996.1 | RidA family protein | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 15596.74 Da Isoelectric Point: 7.5875
>NTDB_id=1043301 ACEN3H_RS01725 WP_373358441.1 365416..365880(+) (pilA) [Acinetobacter lactucae strain 2024CK-01095]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTQIASLSQVGFTAASSGACG
VLAVSTFSTTDGSSTNAITCTLKGNPKIAGKIISLSRSSTGAWTCSTDIATTDKFLPKGCTGGGTPAVGAITTL
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTQIASLSQVGFTAASSGACG
VLAVSTFSTTDGSSTNAITCTLKGNPKIAGKIISLSRSSTGAWTCSTDIATTDKFLPKGCTGGGTPAVGAITTL
Nucleotide
Download Length: 465 bp
>NTDB_id=1043301 ACEN3H_RS01725 WP_373358441.1 365416..365880(+) (pilA) [Acinetobacter lactucae strain 2024CK-01095]
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTATGTGGCCCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAATATGCGTACAGGCTATG
ATACTGAATTAAATGATGGTACCCAAATTGCCTCACTTTCTCAGGTTGGTTTTACAGCTGCTTCTTCAGGTGCATGTGGT
GTATTAGCAGTTTCAACTTTTAGTACAACCGATGGCTCTTCTACAAATGCAATTACTTGTACATTAAAAGGTAATCCAAA
AATTGCAGGCAAAATTATTTCACTTTCACGTTCATCTACTGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACA
AATTCTTACCAAAAGGTTGTACGGGTGGTGGAACACCAGCTGTTGGTGCAATTACTACATTATAA
ATGAATGCACAAAAAGGTTTTACATTAATTGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTATGTGGCCCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAATATGCGTACAGGCTATG
ATACTGAATTAAATGATGGTACCCAAATTGCCTCACTTTCTCAGGTTGGTTTTACAGCTGCTTCTTCAGGTGCATGTGGT
GTATTAGCAGTTTCAACTTTTAGTACAACCGATGGCTCTTCTACAAATGCAATTACTTGTACATTAAAAGGTAATCCAAA
AATTGCAGGCAAAATTATTTCACTTTCACGTTCATCTACTGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACA
AATTCTTACCAAAAGGTTGTACGGGTGGTGGAACACCAGCTGTTGGTGCAATTACTACATTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
63.636 |
100 |
0.636 |
| pilA | Pseudomonas aeruginosa PAK |
44.079 |
98.701 |
0.435 |
| comP | Acinetobacter baylyi ADP1 |
41.29 |
100 |
0.416 |
| pilA | Vibrio cholerae strain A1552 |
40.523 |
99.351 |
0.403 |
| pilA | Vibrio cholerae C6706 |
40.523 |
99.351 |
0.403 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40.523 |
99.351 |
0.403 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
42.254 |
92.208 |
0.39 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
40.426 |
91.558 |
0.37 |