Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | ACDI35_RS06240 | Genome accession | NZ_CP167834 |
| Coordinates | 1407929..1408342 (+) | Length | 137 a.a. |
| NCBI ID | WP_089111877.1 | Uniprot ID | - |
| Organism | Xanthomonas axonopodis pv. cajani strain NCPPB 2063 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1402929..1413342
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDI35_RS06215 (ACDI35_06205) | - | 1403369..1404082 (-) | 714 | Protein_1208 | DUF6531 domain-containing protein | - |
| ACDI35_RS06220 (ACDI35_06210) | coaE | 1404306..1404914 (-) | 609 | WP_022558665.1 | dephospho-CoA kinase | - |
| ACDI35_RS06225 (ACDI35_06215) | - | 1404928..1405791 (-) | 864 | WP_003491180.1 | A24 family peptidase | - |
| ACDI35_RS06230 (ACDI35_06220) | pilC | 1405798..1407057 (-) | 1260 | WP_033836749.1 | type II secretion system F family protein | Machinery gene |
| ACDI35_RS06235 (ACDI35_06225) | comP | 1407403..1407831 (+) | 429 | WP_007962467.1 | pilin | Machinery gene |
| ACDI35_RS06240 (ACDI35_06230) | pilA2 | 1407929..1408342 (+) | 414 | WP_089111877.1 | pilin | Machinery gene |
| ACDI35_RS06245 (ACDI35_06235) | pilB | 1408384..1410120 (+) | 1737 | WP_372376105.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| ACDI35_RS06250 (ACDI35_06240) | pilR | 1410570..1412024 (-) | 1455 | WP_022558668.1 | sigma-54 dependent transcriptional regulator | Regulator |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14079.12 Da Isoelectric Point: 7.6334
>NTDB_id=1039687 ACDI35_RS06240 WP_089111877.1 1407929..1408342(+) (pilA2) [Xanthomonas axonopodis pv. cajani strain NCPPB 2063]
MSRVNGFTLLELMIVVAIVGILSALALPAYQSYVIKARVAEAIILADSAKAAVTQNVNNENALTTTACAGVSGLSSPTNN
VASFTCQGAGVLTVVTTSVAGSVTLSLVPSYNSDRPVVWTCRHVSGSASYVPSDCRN
MSRVNGFTLLELMIVVAIVGILSALALPAYQSYVIKARVAEAIILADSAKAAVTQNVNNENALTTTACAGVSGLSSPTNN
VASFTCQGAGVLTVVTTSVAGSVTLSLVPSYNSDRPVVWTCRHVSGSASYVPSDCRN
Nucleotide
Download Length: 414 bp
>NTDB_id=1039687 ACDI35_RS06240 WP_089111877.1 1407929..1408342(+) (pilA2) [Xanthomonas axonopodis pv. cajani strain NCPPB 2063]
ATGAGCCGGGTAAACGGTTTCACCTTGCTCGAGCTAATGATCGTCGTGGCCATCGTCGGGATATTGTCTGCATTGGCCCT
GCCGGCTTATCAAAGTTATGTAATCAAGGCGCGCGTGGCCGAGGCCATTATTTTGGCTGACTCTGCAAAAGCTGCGGTGA
CGCAGAATGTCAATAATGAAAATGCTTTGACAACTACTGCATGTGCGGGGGTGAGCGGGCTTTCGTCTCCCACTAATAAT
GTAGCTTCTTTCACGTGCCAGGGCGCAGGAGTGCTGACTGTTGTTACGACCAGCGTTGCAGGCTCGGTAACACTATCACT
TGTACCCAGCTACAACTCAGATCGTCCGGTAGTCTGGACTTGCCGACATGTTTCTGGATCGGCTAGCTACGTGCCTTCAG
ATTGCCGAAACTGA
ATGAGCCGGGTAAACGGTTTCACCTTGCTCGAGCTAATGATCGTCGTGGCCATCGTCGGGATATTGTCTGCATTGGCCCT
GCCGGCTTATCAAAGTTATGTAATCAAGGCGCGCGTGGCCGAGGCCATTATTTTGGCTGACTCTGCAAAAGCTGCGGTGA
CGCAGAATGTCAATAATGAAAATGCTTTGACAACTACTGCATGTGCGGGGGTGAGCGGGCTTTCGTCTCCCACTAATAAT
GTAGCTTCTTTCACGTGCCAGGGCGCAGGAGTGCTGACTGTTGTTACGACCAGCGTTGCAGGCTCGGTAACACTATCACT
TGTACCCAGCTACAACTCAGATCGTCCGGTAGTCTGGACTTGCCGACATGTTTCTGGATCGGCTAGCTACGTGCCTTCAG
ATTGCCGAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
48.529 |
99.27 |
0.482 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.625 |
100 |
0.474 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
47.794 |
99.27 |
0.474 |
| comP | Acinetobacter baylyi ADP1 |
41.611 |
100 |
0.453 |
| pilA | Haemophilus influenzae 86-028NP |
35.714 |
100 |
0.365 |