Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AB6N02_RS20685 | Genome accession | NZ_CP163510 |
| Coordinates | 4389323..4389640 (+) | Length | 105 a.a. |
| NCBI ID | WP_010675541.1 | Uniprot ID | A0A3G9I3Z2 |
| Organism | Aeromonas caviae strain 103 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4384323..4394640
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB6N02_RS20660 (AB6N02_20660) | - | 4385016..4385648 (-) | 633 | WP_029314795.1 | hemolysin III family protein | - |
| AB6N02_RS20665 (AB6N02_20665) | - | 4385840..4387345 (+) | 1506 | WP_010675537.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| AB6N02_RS20670 (AB6N02_20670) | - | 4387450..4388001 (+) | 552 | WP_010675538.1 | septation protein A | - |
| AB6N02_RS20675 (AB6N02_20675) | - | 4388026..4388322 (+) | 297 | WP_010675539.1 | YciI family protein | - |
| AB6N02_RS20680 (AB6N02_20680) | cysQ | 4388386..4389156 (-) | 771 | WP_010675540.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| AB6N02_RS20685 (AB6N02_20685) | comEA | 4389323..4389640 (+) | 318 | WP_010675541.1 | ComEA family DNA-binding protein | Machinery gene |
| AB6N02_RS20690 (AB6N02_20690) | galU | 4389735..4390646 (+) | 912 | WP_010675542.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| AB6N02_RS20695 (AB6N02_20695) | - | 4390860..4392257 (+) | 1398 | WP_029314796.1 | peptide MFS transporter | - |
| AB6N02_RS20700 (AB6N02_20700) | - | 4392328..4393299 (-) | 972 | WP_029314797.1 | response regulator | - |
| AB6N02_RS20705 (AB6N02_20705) | - | 4393575..4394249 (+) | 675 | WP_039041329.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11006.90 Da Isoelectric Point: 10.1059
>NTDB_id=1030231 AB6N02_RS20685 WP_010675541.1 4389323..4389640(+) (comEA) [Aeromonas caviae strain 103]
MNKKTLIAALLLSCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
MNKKTLIAALLLSCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=1030231 AB6N02_RS20685 WP_010675541.1 4389323..4389640(+) (comEA) [Aeromonas caviae strain 103]
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGAGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGAGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50.943 |
100 |
0.514 |
| comEA | Vibrio cholerae strain A1552 |
50.943 |
100 |
0.514 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.476 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.535 |
96.19 |
0.448 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |
| comEA | Acinetobacter baylyi ADP1 |
46.914 |
77.143 |
0.362 |