Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   AB3Z07_RS10755 Genome accession   NZ_CP162630
Coordinates   2239989..2241236 (+) Length   415 a.a.
NCBI ID   WP_368659229.1    Uniprot ID   -
Organism   Metabacillus halosaccharovorans strain Hao 2024     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2234989..2246236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3Z07_RS10725 (AB3Z07_10725) - 2235024..2236310 (+) 1287 WP_251682754.1 pitrilysin family protein -
  AB3Z07_RS10730 (AB3Z07_10730) - 2236404..2237114 (+) 711 WP_251682753.1 SDR family oxidoreductase -
  AB3Z07_RS10735 (AB3Z07_10735) - 2237184..2237441 (+) 258 WP_078434286.1 DUF3243 domain-containing protein -
  AB3Z07_RS10740 (AB3Z07_10740) - 2237550..2238341 (+) 792 WP_078434285.1 DUF3388 domain-containing protein -
  AB3Z07_RS10745 (AB3Z07_10745) - 2238358..2239239 (+) 882 WP_368659228.1 helix-turn-helix domain-containing protein -
  AB3Z07_RS10750 (AB3Z07_10750) pgsA 2239381..2239959 (+) 579 WP_026559279.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  AB3Z07_RS10755 (AB3Z07_10755) cinA 2239989..2241236 (+) 1248 WP_368659229.1 competence/damage-inducible protein A Machinery gene
  AB3Z07_RS10760 (AB3Z07_10760) recA 2241540..2242580 (+) 1041 WP_368659230.1 recombinase RecA Machinery gene
  AB3Z07_RS10765 (AB3Z07_10765) rny 2243048..2244613 (+) 1566 WP_139367385.1 ribonuclease Y -
  AB3Z07_RS10770 (AB3Z07_10770) - 2244874..2245668 (+) 795 WP_026559275.1 TIGR00282 family metallophosphoesterase -
  AB3Z07_RS10775 (AB3Z07_10775) spoVS 2245874..2246134 (+) 261 WP_003181955.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 415 a.a.        Molecular weight: 45598.02 Da        Isoelectric Point: 5.7697

>NTDB_id=1027667 AB3Z07_RS10755 WP_368659229.1 2239989..2241236(+) (cinA) [Metabacillus halosaccharovorans strain Hao 2024]
MDIRTEIIAVGSELLLGQIANTNAQFLSKELAEIGLNVYYHTVVGDNPARLESAIKIAKERSNIIIFTGGLGPTKDDLTK
ETISKSLGKTLVFDHDALESIEDYFARTKRTMSENNKKQALVIEGSTILKNDYGMAPGMALETDKTIYMLLPGPPSEMRP
MFKNYGRKYFQNQLGIQDKIVSRVLRYFGIGESQLETDIQDLIDGQTNPTVAPLAADGEVTLRLTAKHTDEKTAQKLLDE
VERKINARVGDFFYGYNETTLINEVKAQLVKKKKTIAAAESLTGGMFSELVTSLEGASQVFNGSIISYTNAVKKQILHIQ
EETLAAYGAVSEQCAKEMAEQVRKLLNSDIGISFTGAAGPEPHEGQPVGTVFIGIADKDQTNVYALNLAGSRTGIRTRTA
KYGCHYLVKLLNEIE

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=1027667 AB3Z07_RS10755 WP_368659229.1 2239989..2241236(+) (cinA) [Metabacillus halosaccharovorans strain Hao 2024]
ATGGATATACGTACTGAGATTATTGCTGTTGGATCAGAATTGTTATTAGGTCAAATAGCCAATACCAATGCTCAATTTTT
ATCAAAGGAACTTGCTGAGATTGGTTTAAATGTTTATTATCATACTGTTGTGGGAGACAACCCTGCTCGGCTTGAGTCAG
CAATAAAGATTGCAAAAGAACGTTCAAATATTATTATCTTTACAGGTGGACTTGGTCCAACCAAAGATGATTTAACAAAG
GAAACGATTTCTAAATCATTAGGTAAAACTCTAGTCTTTGACCACGATGCTTTAGAGAGTATTGAGGATTACTTTGCCCG
GACTAAACGGACGATGTCAGAAAATAATAAAAAGCAGGCCCTTGTTATTGAGGGTTCAACGATATTGAAAAATGATTATG
GTATGGCACCTGGAATGGCTTTGGAAACTGACAAAACGATCTATATGCTTTTACCCGGTCCACCAAGTGAAATGAGACCA
ATGTTCAAAAATTATGGAAGAAAATACTTTCAAAACCAACTAGGGATTCAGGATAAAATCGTTTCACGTGTGTTAAGATA
TTTCGGTATTGGTGAATCTCAACTTGAAACTGATATACAGGATCTTATTGATGGACAAACAAATCCAACCGTCGCTCCCT
TAGCAGCAGATGGTGAAGTCACTCTTAGACTAACGGCAAAGCATACAGATGAAAAAACTGCTCAAAAATTACTAGATGAA
GTAGAAAGAAAGATTAATGCTCGTGTAGGTGACTTTTTCTATGGATATAATGAAACAACTCTTATAAATGAGGTAAAGGC
ACAACTGGTTAAAAAGAAAAAAACAATTGCTGCAGCAGAGAGTTTAACTGGCGGTATGTTTTCAGAGCTTGTCACTTCAT
TGGAAGGTGCCTCTCAAGTTTTTAATGGAAGTATTATCTCGTATACGAATGCAGTGAAAAAACAAATTTTACATATACAA
GAAGAAACTCTTGCGGCATACGGAGCTGTAAGTGAACAATGTGCAAAGGAAATGGCTGAACAGGTTCGTAAACTACTTAA
TAGTGATATTGGTATTAGTTTTACAGGTGCTGCCGGACCTGAACCACATGAAGGTCAACCAGTTGGAACAGTGTTTATTG
GTATAGCTGACAAGGATCAAACAAACGTTTATGCTTTAAACTTAGCTGGTTCAAGAACAGGAATCCGTACAAGAACGGCA
AAGTATGGATGTCACTATTTGGTCAAACTATTAAATGAAATAGAATGA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(182-255)

Competence-damaged protein (CinA)

(259-410)

Probable molybdopterin binding domain (MoCF_biosynth)

(7-166)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

62.683

98.795

0.619
  cinA Streptococcus mitis SK321

48.449

100

0.489
  cinA Streptococcus pneumoniae TIGR4

47.733

100

0.482
  cinA Streptococcus pneumoniae Rx1

47.733

100

0.482
  cinA Streptococcus pneumoniae R6

47.733

100

0.482
  cinA Streptococcus mitis NCTC 12261

47.733

100

0.482
  cinA Streptococcus pneumoniae D39

47.494

100

0.48
  cinA Streptococcus mutans UA159

47.87

96.145

0.46
  cinA Streptococcus suis isolate S10

39.225

99.518

0.39

Multiple sequence alignment