Detailed information NTG1020702

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: AB1F71_RS09100
• Genome accession: NZ_CP160386
• Coordinates: 1842742..1843137 (-)
• Length: 131 a.a.
• NCBI ID: WP_002263454.1
• Uniprot ID: Q8DS68
• Organism: Streptococcus mutans strain UA159 ykuR deletion
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1837742..1848137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F71_RS09075 (AB1F71_09075)	-	1837792..1837995 (-)	204	WP_002279759.1	hypothetical protein	-
AB1F71_RS09080 (AB1F71_09080)	-	1838062..1839369 (-)	1308	WP_002263458.1	extracellular solute-binding protein	-
AB1F71_RS09085 (AB1F71_09085)	-	1839362..1840042 (-)	681	WP_002263457.1	response regulator transcription factor	-
AB1F71_RS09090 (AB1F71_09090)	-	1840042..1841364 (-)	1323	WP_002263456.1	sensor histidine kinase	-
AB1F71_RS09095 (AB1F71_09095)	-	1841364..1842326 (-)	963	WP_002263455.1	sugar ABC transporter substrate-binding protein	-
AB1F71_RS09100 (AB1F71_09100)	ssbA	1842742..1843137 (-)	396	WP_002263454.1	single-stranded DNA-binding protein	Machinery gene
AB1F71_RS09105 (AB1F71_09105)	-	1843224..1843580 (-)	357	WP_002263453.1	rhodanese-like domain-containing protein	-
AB1F71_RS09110 (AB1F71_09110)	-	1843580..1844002 (-)	423	WP_002263452.1	MarR family transcriptional regulator	-
AB1F71_RS09115 (AB1F71_09115)	ytpR	1844100..1844726 (-)	627	WP_002263451.1	YtpR family tRNA-binding protein	-
AB1F71_RS09120 (AB1F71_09120)	-	1844723..1845052 (-)	330	WP_002263450.1	thioredoxin family protein	-
AB1F71_RS09125 (AB1F71_09125)	-	1845030..1845338 (-)	309	WP_002263449.1	DUF4651 domain-containing protein	-
AB1F71_RS09130 (AB1F71_09130)	pepA	1845398..1846465 (+)	1068	WP_002263448.1	glutamyl aminopeptidase	-
AB1F71_RS09135 (AB1F71_09135)	proC	1846521..1847291 (+)	771	WP_002263447.1	pyrroline-5-carboxylate reductase	-
AB1F71_RS09140 (AB1F71_09140)	-	1847376..1848038 (-)	663	WP_002263446.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14841.90 Da
• Isoelectric Point: 6.4855

>NTDB_id=1020702 AB1F71_RS09100 WP_002263454.1 1842742..1843137(-) (ssbA) [Streptococcus mutans strain UA159 ykuR deletion]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1020702 AB1F71_RS09100 WP_002263454.1 1842742..1843137(-) (ssbA) [Streptococcus mutans strain UA159 ykuR deletion]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTAGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: Q8DS68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	100	100	1
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	58.036	85.496	0.496
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405