Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AB0R80_RS07150 Genome accession   NZ_CP160213
Coordinates   1404472..1404936 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain JM199     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1399472..1409936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R80_RS07130 (AB0R80_07130) - 1399952..1401772 (+) 1821 WP_094032395.1 PAS domain-containing protein -
  AB0R80_RS07135 (AB0R80_07135) - 1401797..1402966 (-) 1170 WP_015417364.1 aminotransferase A -
  AB0R80_RS07140 (AB0R80_07140) - 1403167..1403328 (-) 162 WP_324635915.1 hypothetical protein -
  AB0R80_RS07145 (AB0R80_07145) cheV 1403517..1404428 (+) 912 WP_039251615.1 chemotaxis protein CheV -
  AB0R80_RS07150 (AB0R80_07150) kre 1404472..1404936 (-) 465 WP_003154622.1 YkyB family protein Regulator
  AB0R80_RS07155 (AB0R80_07155) - 1405059..1406351 (-) 1293 WP_094032396.1 MFS transporter -
  AB0R80_RS07160 (AB0R80_07160) - 1406427..1406921 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  AB0R80_RS07165 (AB0R80_07165) - 1406996..1407859 (-) 864 WP_327935152.1 metallophosphoesterase -
  AB0R80_RS07170 (AB0R80_07170) fadH 1408004..1408768 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  AB0R80_RS07175 (AB0R80_07175) - 1408882..1409430 (+) 549 WP_327935150.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=1019155 AB0R80_RS07150 WP_003154622.1 1404472..1404936(-) (kre) [Bacillus velezensis strain JM199]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1019155 AB0R80_RS07150 WP_003154622.1 1404472..1404936(-) (kre) [Bacillus velezensis strain JM199]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment