Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   FGL05_RS07055 Genome accession   NZ_LR594044
Coordinates   1440487..1441521 (-) Length   344 a.a.
NCBI ID   WP_111712639.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain NCTC8796     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1435487..1446521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL05_RS07030 (NCTC8796_01491) - 1436515..1437582 (-) 1068 WP_043894959.1 bifunctional glycosyltransferase family 2/GtrA family protein -
  FGL05_RS07035 (NCTC8796_01492) - 1437579..1438610 (-) 1032 WP_111712641.1 sensor domain-containing diguanylate cyclase -
  FGL05_RS07045 (NCTC8796_01493) trmB 1438975..1439613 (-) 639 WP_111712640.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGL05_RS07050 (NCTC8796_01494) - 1439613..1440380 (-) 768 WP_288573826.1 phosphotransferase family protein -
  FGL05_RS07055 (NCTC8796_01495) pptB 1440487..1441521 (-) 1035 WP_111712639.1 ABC transporter permease Regulator
  FGL05_RS07060 (NCTC8796_01496) pptA 1441524..1442249 (-) 726 WP_111712638.1 ABC transporter ATP-binding protein Regulator
  FGL05_RS07065 (NCTC8796_01497) - 1442313..1442732 (+) 420 WP_111712637.1 HIT family protein -
  FGL05_RS07070 (NCTC8796_01498) - 1442729..1443034 (+) 306 WP_058833229.1 hypothetical protein -
  FGL05_RS07075 (NCTC8796_01499) - 1443120..1444280 (-) 1161 WP_111712636.1 LCP family protein -
  FGL05_RS07080 (NCTC8796_01500) - 1444291..1444803 (-) 513 WP_111698233.1 GNAT family protein -
  FGL05_RS07085 (NCTC8796_01501) tsaE 1444796..1445239 (-) 444 WP_058813650.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39977.43 Da        Isoelectric Point: 10.3438

>NTDB_id=1005592 FGL05_RS07055 WP_111712639.1 1440487..1441521(-) (pptB) [Streptococcus lutetiensis strain NCTC8796]
MKEVFRKRRSLFLGQCLKYLRYVLNDHFVLVLLFLSGFLMVQYGELLKHFPKRHWWLEAILVIVTVALLSLGKIATYIEA
PDKLFYLPKEEEVVAWIHQARVRSFGVWAVLQTAVFLLLAPIFFKLGFSIPVFSVLLLILLGIKWVIMARKEKVFFRDDH
FSWEAAITYETKRRQSILKFFALFTTVKGISASVKRRAYLDKLLVLVKKGHDKTWSNLYLRAFLRSSDYLALTLRLVLLS
VLALLFIPNHLVAVGLALILNYLLLFQLLGLAQHFEYQYLTRLYPISEIQKLANLKALLKTLSYVICLIELLLCFSLKAA
GLLILITVIVTEWYLPYKIAKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=1005592 FGL05_RS07055 WP_111712639.1 1440487..1441521(-) (pptB) [Streptococcus lutetiensis strain NCTC8796]
ATGAAAGAAGTTTTTCGAAAACGACGCAGCCTCTTTTTAGGGCAATGTCTGAAATACTTACGTTATGTATTGAATGATCA
CTTTGTCTTGGTCTTGCTTTTCTTATCAGGTTTTTTGATGGTTCAATACGGAGAACTATTGAAGCATTTTCCAAAGCGGC
ATTGGTGGCTTGAGGCTATTCTAGTTATTGTGACAGTTGCCCTGCTTAGTCTTGGAAAAATTGCGACTTATATTGAGGCA
CCAGATAAACTATTTTATTTGCCAAAGGAAGAAGAAGTGGTGGCTTGGATTCATCAAGCGAGAGTGCGTTCTTTTGGTGT
TTGGGCAGTTTTGCAAACGGCTGTTTTCTTGTTGTTAGCACCCATTTTCTTTAAATTAGGTTTCTCAATTCCTGTATTTT
CGGTACTTTTGCTAATTTTGCTTGGTATCAAGTGGGTGATTATGGCAAGAAAAGAAAAAGTCTTTTTTAGAGATGATCAT
TTTTCTTGGGAAGCTGCCATTACTTATGAAACTAAGCGTCGTCAATCTATTTTGAAATTCTTTGCTCTCTTTACAACGGT
TAAAGGAATTTCAGCAAGCGTCAAACGTCGTGCTTACTTAGATAAGCTTCTTGTTTTGGTTAAGAAAGGTCACGATAAAA
CATGGTCAAACCTTTATCTTAGGGCTTTTCTTCGCAGTTCAGATTATCTAGCTTTGACCTTGCGTTTAGTTTTGTTAAGT
GTTCTTGCTTTGCTATTTATTCCAAATCATTTGGTAGCAGTTGGACTTGCTTTGATTTTGAATTATCTTTTACTGTTTCA
GTTGTTAGGACTTGCCCAACATTTTGAGTATCAATATTTAACACGCTTATACCCTATTTCAGAAATACAGAAACTGGCTA
ATTTAAAGGCTTTGTTGAAGACTTTGTCTTATGTTATTTGCTTGATTGAGCTTCTGCTATGTTTTTCTTTGAAGGCTGCA
GGGCTTCTGATTTTGATTACTGTAATTGTTACAGAATGGTATCTTCCTTACAAAATTGCGAAGATGATTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.821

100

0.471

  pptB Streptococcus salivarius strain HSISS4

45.954

100

0.462


Multiple sequence alignment