Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis1

TA loci of Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis

Number of TA loci: experimental0; insolico25

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA047225 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS00865 (higB) FH07_RS00870 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA047226 Prophage Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS01730 (panT) FH07_RS01725 (panA) PanAT/DUF4065(antitoxin)
in_silico TA047228 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS03000 (chpB) FH07_RS02995 (chpS) chpSB/PRK09812-ChpS
in_silico TA047230 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS03760 (shpA) FH07_RS03765 (shpB) shpAB/BrnT-BrnA
in_silico TA047231 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS04310 (ccdB) FH07_RS04305 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA047232 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS05340 (yafO) FH07_RS05335 (yafN) yafN-yafO (relBE)/YafO-YafN
in_silico TA047233 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS06300 (Hha) FH07_RS06305 (TomB) Hha-TomB/-
in_silico TA047234 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS06415 (higB) FH07_RS06420 (higA) higBA (relBE)/HigB-HTH_XRE
in_silico TA047235 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS08505 (relE) FH07_RS08500 (relB) relBE/RelE-HTH_XRE
in_silico TA047236 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS11790 (hicA) FH07_RS11795 (hicB) hicAB/UPF0150(antitoxin)
in_silico TA047246 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS14830 (yoeB) FH07_RS14835 (yefM) yefM-yoeB (relBE)/YoeB-YefM
in_silico TA047247 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS18875 (mazF) FH07_RS18880 (mazE) mazEF/PRK09907-MazE
in_silico TA047250 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS21435 (yhaV) FH07_RS21430 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA047251 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS23990 (hicA) FH07_RS23985 (hicB) hicAB/HicA-HicB
in_silico TA047284 Plasmid Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (plasmid pEC648_1) NZ_CP008715 FH07_RS25045 (ccdB) FH07_RS25050 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA047285 Plasmid Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (plasmid pEC648_1) NZ_CP008715 FH07_RS25085 (vagD) FH07_RS25080 (vagC) vagCD/VapC-VagC
in_silico TA047286 Plasmid IS/Tn Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (plasmid pEC648_1) NZ_CP008715 FH07_RS25100 (vagD) FH07_RS25095 (vagC) vagCD/VapC-VagC
in_silico TA047287 Plasmid Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (plasmid pEC648_1) NZ_CP008715 FH07_RS25245 (relE) FH07_RS25250 (relB) relBE/RHH(antitoxin)
experimentalExperimentally validated     insolicoBioinformatically predicted