TA loci of Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis

Number of TA loci: experimental0; insolico25

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA047225 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS00865 (higB) FH07_RS00870 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA047226 Prophage Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS01730 (panT) FH07_RS01725 (panA) PanAT/DUF4065(antitoxin)
in_silico TA047228 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS03000 (chpB) FH07_RS02995 (chpS) chpSB/PRK09812-ChpS
in_silico TA047230 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS03760 (shpA) FH07_RS03765 (shpB) shpAB/BrnT-BrnA
in_silico TA047231 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS04310 (ccdB) FH07_RS04305 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA047232 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS05340 (yafO) FH07_RS05335 (yafN) yafN-yafO (relBE)/YafO-YafN
in_silico TA047233 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS06300 (Hha) FH07_RS06305 (TomB) Hha-TomB/-
in_silico TA047234 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS06415 (higB) FH07_RS06420 (higA) higBA (relBE)/HigB-HTH_XRE
in_silico TA047235 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS08505 (relE) FH07_RS08500 (relB) relBE/RelE-HTH_XRE
in_silico TA047236 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS11790 (hicA) FH07_RS11795 (hicB) hicAB/UPF0150(antitoxin)
in_silico TA047246 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS14830 (yoeB) FH07_RS14835 (yefM) yefM-yoeB (relBE)/YoeB-YefM
in_silico TA047247 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS18875 (mazF) FH07_RS18880 (mazE) mazEF/PRK09907-MazE
in_silico TA047250 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS21435 (yhaV) FH07_RS21430 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA047251 - Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (chromosome) NZ_CP008697 FH07_RS23990 (hicA) FH07_RS23985 (hicB) hicAB/HicA-HicB
in_silico TA047284 Plasmid Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (plasmid pEC648_1) NZ_CP008715 FH07_RS25045 (ccdB) FH07_RS25050 (ccdA) ccdAB/CcdA(antitoxin)
in_silico TA047285 Plasmid Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (plasmid pEC648_1) NZ_CP008715 FH07_RS25085 (vagD) FH07_RS25080 (vagC) vagCD/VapC-VagC
in_silico TA047286 Plasmid IS/Tn Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (plasmid pEC648_1) NZ_CP008715 FH07_RS25100 (vagD) FH07_RS25095 (vagC) vagCD/VapC-VagC
in_silico TA047287 Plasmid Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis (plasmid pEC648_1) NZ_CP008715 FH07_RS25245 (relE) FH07_RS25250 (relB) relBE/RHH(antitoxin)
experimentalExperimentally validated     insolicoBioinformatically predicted