MGE detailed information
MGE type: Prophage MGE length: 47977 bp
Accession: NZ_CP008697 Location: 348793..396769 Organism: Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis Replicon: chromosome
Accession: NZ_CP008697 Location: 348793..396769 Organism: Escherichia coli strain ST648 isolate Pleural Effusion of Patients with Empyema Thoracis Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FH07_RS01680 () | 344184..344681 | + | 498 | WP_001308201.1 | chorismate lyase | - |
| FH07_RS01685 () | 344694..345566 | + | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| FH07_RS01690 () | 345721..348144 | - | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| FH07_RS01695 () | 348315..348683 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| FH07_RS01700 () | 348793..349401 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| FH07_RS01705 () | 349474..350799 | + | 1326 | WP_001361471.1 | MATE family efflux transporter DinF | - |
| FH07_RS01710 () | 350915..351124 | + | 210 | WP_001296638.1 | CsbD family protein | - |
| FH07_RS01715 () | 351166..351681 | - | 516 | WP_000416263.1 | zinc uptake transcriptional repressor Zur | - |
| FH07_RS01720 () | 351999..353003 | + | 1005 | WP_022646425.1 | DUF2713 family protein | - |
| FH07_RS25870 () | 353365..353487 | + | 123 | WP_001300034.1 | hypothetical protein | - |
| FH07_RS01725 () | 353723..354295 | + | 573 | WP_060684349.1 | SocA family protein | Antitoxin Detail |
| FH07_RS01730 () | 354325..354711 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| FH07_RS28735 () | 354751..354924 | + | 174 | WP_023908888.1 | hypothetical protein | - |
| FH07_RS01735 () | 354972..355253 | - | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| FH07_RS01740 () | 355290..356042 | - | 753 | WP_024946495.1 | hypothetical protein | - |
| FH07_RS01745 () | 356261..357085 | - | 825 | WP_023908886.1 | DUF2303 family protein | - |
| FH07_RS01750 () | 357151..357513 | - | 363 | WP_000135686.1 | hypothetical protein | - |
| FH07_RS01755 () | 358181..358855 | - | 675 | WP_021530636.1 | LexA family transcriptional regulator | - |
| FH07_RS01760 () | 358946..359146 | + | 201 | WP_021527487.1 | helix-turn-helix domain-containing protein | - |
| FH07_RS01765 () | 359190..359747 | + | 558 | WP_024946496.1 | hypothetical protein | - |
| FH07_RS25885 () | 359923..360102 | + | 180 | WP_071789194.1 | DUF4222 domain-containing protein | - |
| FH07_RS01775 () | 360092..361033 | + | 942 | WP_023908882.1 | helix-turn-helix domain-containing protein | - |
| FH07_RS01780 () | 361030..361518 | + | 489 | WP_023908881.1 | PerC family transcriptional regulator | - |
| FH07_RS01785 () | 361518..362171 | + | 654 | WP_001401088.1 | phage N-6-adenine-methyltransferase | - |
| FH07_RS01790 () | 362168..362494 | + | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| FH07_RS01795 () | 362491..362880 | + | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FH07_RS01800 () | 362900..363709 | + | 810 | WP_023908880.1 | KilA-N domain-containing protein | - |
| FH07_RS01805 () | 363717..364707 | + | 991 | Protein_332 | DUF968 domain-containing protein | - |
| FH07_RS01810 () | 364721..365473 | + | 753 | WP_023908878.1 | antitermination protein | - |
| FH07_RS01815 () | 365666..365869 | + | 204 | WP_001181554.1 | hypothetical protein | - |
| FH07_RS01820 () | 365999..366334 | + | 336 | WP_024946499.1 | phage holin, lambda family | - |
| FH07_RS01825 () | 366338..366814 | + | 477 | WP_021543581.1 | glycoside hydrolase family protein | - |
| FH07_RS01830 () | 366811..367254 | + | 444 | WP_023908876.1 | lysis protein | - |
| FH07_RS01835 () | 367293..367667 | + | 375 | WP_021543580.1 | hypothetical protein | - |
| FH07_RS01840 () | 367785..367988 | + | 204 | WP_000699783.1 | hypothetical protein | - |
| FH07_RS01845 () | 368054..368404 | + | 351 | WP_024946501.1 | HNH endonuclease | - |
| FH07_RS01850 () | 368531..369025 | + | 495 | WP_000929184.1 | phage terminase small subunit P27 family | - |
| FH07_RS01855 () | 369259..370755 | + | 1497 | WP_065312442.1 | terminase large subunit | - |
| FH07_RS01860 () | 370767..370949 | + | 183 | WP_000605605.1 | hypothetical protein | - |
| FH07_RS01865 () | 370949..372190 | + | 1242 | WP_023908874.1 | phage portal protein | - |
| FH07_RS01870 () | 372168..372818 | + | 651 | WP_001193633.1 | HK97 family phage prohead protease | - |
| FH07_RS01875 () | 372833..374038 | + | 1206 | WP_023908873.1 | phage major capsid protein | - |
| FH07_RS01880 () | 374088..374276 | + | 189 | WP_023908872.1 | hypothetical protein | - |
| FH07_RS01885 () | 374288..374593 | + | 306 | WP_021543573.1 | head-tail connector protein | - |
| FH07_RS01890 () | 374603..374941 | + | 339 | WP_021543572.1 | phage head closure protein | - |
| FH07_RS01895 () | 374938..375387 | + | 450 | WP_021543571.1 | HK97 gp10 family phage protein | - |
| FH07_RS01900 () | 375384..375728 | + | 345 | WP_021543570.1 | DUF3168 domain-containing protein | - |
| FH07_RS01905 () | 375788..376492 | + | 705 | WP_023908871.1 | immunoglobulin domain-containing protein | - |
| FH07_RS01910 () | 376507..376878 | + | 372 | WP_021543568.1 | phage tail assembly chaperone | - |
| FH07_RS01915 () | 376902..377180 | + | 279 | WP_021543567.1 | DUF4035 domain-containing protein | - |
| FH07_RS01920 () | 377239..377580 | + | 342 | WP_021543566.1 | zinc ribbon domain-containing protein | - |
| FH07_RS01925 () | 377625..380867 | + | 3243 | WP_024946502.1 | phage tail tape measure protein | - |
| FH07_RS01930 () | 380860..381201 | + | 342 | WP_023908869.1 | phage tail protein | - |
| FH07_RS01935 () | 381201..381899 | + | 699 | WP_021543563.1 | phage minor tail protein L | - |
| FH07_RS01940 () | 381904..382647 | + | 744 | WP_032152077.1 | C40 family peptidase | - |
| FH07_RS01945 () | 382545..383192 | + | 648 | WP_000741576.1 | tail assembly protein | - |
| FH07_RS01950 () | 383253..386732 | + | 3480 | WP_060684350.1 | host specificity protein J | - |
| FH07_RS01955 () | 386800..387399 | + | 600 | WP_001228252.1 | Outer membrane protein X | VF |
| FH07_RS01960 () | 387464..389812 | + | 2349 | WP_022646430.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FH07_RS01965 () | 389809..390090 | + | 282 | WP_022646431.1 | hypothetical protein | - |
| FH07_RS01970 () | 390100..390804 | + | 705 | WP_001595444.1 | tail fiber domain-containing protein | - |
| FH07_RS01975 () | 390815..391102 | + | 288 | WP_022646432.1 | hypothetical protein | - |
| FH07_RS01980 () | 391213..391461 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| FH07_RS01985 () | 391523..392620 | - | 1098 | WP_000332260.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| FH07_RS01990 () | 392709..393746 | + | 1038 | WP_000543825.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| FH07_RS01995 () | 393880..394122 | + | 243 | WP_000891408.1 | envelope stress response protein PspG | - |
| FH07_RS02000 () | 394288..395271 | - | 984 | WP_022646433.1 | Quinone oxidoreductase 1 | VF |
| FH07_RS02005 () | 395354..396769 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| FH07_RS02010 () | 396822..397901 | + | 1080 | WP_001147328.1 | alanine racemase | - |
| FH07_RS02015 () | 398154..399347 | + | 1194 | WP_022646434.1 | aromatic amino acid transaminase | - |
| FH07_RS02020 () | 399570..400073 | - | 504 | WP_001027697.1 | hypothetical protein | - |
| FH07_RS02025 () | 400473..401186 | + | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| FH07_RS02030 () | 401297..401713 | + | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|