MGE detailed information
MGE type: Integron MGE length: 85866 bp
Accession: NC_012583 Location: 344619..430484 Organism: Vibrio cholerae O395 Replicon: chromosome II
Accession: NC_012583 Location: 344619..430484 Organism: Vibrio cholerae O395 Replicon: chromosome II
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VC395_RS15780 () | 340069..340740 | + | 672 | WP_000132861.1 | hypothetical protein | - |
| VC395_RS21025 () | 340865..341092 | + | 228 | WP_001911595.1 | hypothetical protein | - |
| VC395_RS15790 () | 341361..343289 | + | 1929 | WP_001121783.1 | threonine--tRNA ligase | - |
| VC395_RS15795 () | 343293..343844 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| VC395_RS15800 () | 343948..344142 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| VC395_RS15805 () | 344184..344537 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| VC395_RS15810 () | 344619..345581 | - | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| VC395_RS15815 () | 345826..346425 | + | 600 | WP_000429496.1 | hypothetical protein | - |
| VC395_RS15820 () | 346704..347303 | + | 600 | WP_000429495.1 | hypothetical protein | - |
| VC395_RS15825 () | 347589..348272 | + | 684 | WP_000877436.1 | hypothetical protein | - |
| VC395_RS21030 () | 349013..349108 | + | 96 | WP_012706049.1 | DUF645 family protein | - |
| VC395_RS15835 () | 349302..349619 | - | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC395_RS15840 () | 349638..349880 | - | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC395_RS15845 () | 350122..350631 | + | 510 | WP_000405986.1 | GNAT family N-acetyltransferase | - |
| VC395_RS15850 () | 350688..351341 | + | 654 | WP_000226874.1 | hypothetical protein | - |
| VC395_RS15855 () | 351651..351869 | + | 219 | WP_001917086.1 | DUF3709 domain-containing protein | - |
| VC395_RS15860 () | 352272..352505 | + | 234 | WP_032482776.1 | DUF3709 domain-containing protein | - |
| VC395_RS15865 () | 352930..353110 | + | 181 | Protein_313 | DUF645 family protein | - |
| VC395_RS15870 () | 353377..353664 | + | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC395_RS15875 () | 353675..353992 | + | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| VC395_RS21035 () | 353989..354099 | + | 111 | WP_134814058.1 | DUF3265 domain-containing protein | - |
| VC395_RS20120 () | 354276..354401 | + | 126 | WP_001944767.1 | DUF645 family protein | - |
| VC395_RS20805 () | 354417..354455 | + | 39 | WP_106019119.1 | hypothetical protein | - |
| VC395_RS15885 () | 354679..355419 | + | 741 | WP_000469836.1 | PhzF family phenazine biosynthesis protein | - |
| VC395_RS15890 () | 355624..356454 | + | 831 | WP_000056616.1 | abortive infection family protein | - |
| VC395_RS15895 () | 356511..356993 | + | 483 | WP_001895003.1 | hypothetical protein | - |
| VC395_RS15905 () | 357440..358315 | + | 876 | WP_000259044.1 | hypothetical protein | - |
| VC395_RS15910 () | 358445..358900 | + | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| VC395_RS21110 () | 358957..359052 | + | 96 | WP_080368267.1 | acetyltransferase | - |
| VC395_RS15915 () | 359084..359497 | + | 414 | WP_000049417.1 | VOC family protein | - |
| VC395_RS15920 () | 359648..360082 | + | 435 | WP_000453957.1 | GNAT family N-acetyltransferase | - |
| VC395_RS20150 () | 360868..361038 | + | 171 | WP_000483445.1 | DUF645 family protein | - |
| VC395_RS15930 () | 361241..361738 | - | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| VC395_RS15935 () | 361735..362007 | - | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| VC395_RS15940 () | 362397..362579 | + | 183 | WP_000947517.1 | DUF645 family protein | - |
| VC395_RS15945 () | 362793..363188 | + | 396 | WP_000870841.1 | DUF3465 domain-containing protein | - |
| VC395_RS15950 () | 363380..363703 | + | 324 | WP_001889156.1 | DUF3709 domain-containing protein | - |
| VC395_RS15960 () | 364132..364311 | + | 180 | WP_001889214.1 | DUF645 family protein | - |
| VC395_RS20610 () | 364838..364960 | + | 123 | WP_086027501.1 | DUF3265 domain-containing protein | - |
| VC395_RS15965 () | 365128..365310 | + | 183 | WP_000923182.1 | DUF645 family protein | - |
| VC395_RS15970 () | 365510..365983 | + | 474 | WP_001161076.1 | GrpB family protein | - |
| VC395_RS20170 () | 365998..366090 | + | 93 | WP_014378730.1 | DUF3265 domain-containing protein | - |
| VC395_RS15975 () | 366132..366758 | + | 627 | WP_000365423.1 | LysE family translocator | - |
| VC395_RS15980 () | 366881..367579 | + | 699 | WP_001890502.1 | hypothetical protein | - |
| VC395_RS20175 () | 367589..367699 | + | 111 | WP_079857360.1 | DUF3265 domain-containing protein | - |
| VC395_RS15990 () | 368276..368455 | + | 180 | WP_001883058.1 | DUF645 family protein | - |
| VC395_RS15995 () | 368669..369064 | + | 396 | WP_000870857.1 | DUF3465 domain-containing protein | - |
| VC395_RS16000 () | 369192..369491 | - | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC395_RS16005 () | 369488..369730 | - | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| VC395_RS19655 () | 369959..370537 | + | 579 | WP_000110120.1 | hypothetical protein | - |
| VC395_RS20190 () | 370559..370651 | + | 93 | WP_014164112.1 | DUF3265 domain-containing protein | - |
| VC395_RS16020 () | 371075..371758 | + | 684 | WP_000877436.1 | hypothetical protein | - |
| VC395_RS16025 () | 371972..372238 | + | 267 | WP_000937852.1 | hypothetical protein | - |
| VC395_RS16030 () | 372393..372992 | + | 600 | WP_000429495.1 | hypothetical protein | - |
| VC395_RS16035 () | 373348..373614 | + | 267 | WP_000937852.1 | hypothetical protein | - |
| VC395_RS16040 () | 373769..374368 | + | 600 | WP_000429495.1 | hypothetical protein | - |
| VC395_RS16045 () | 374649..375584 | + | 936 | WP_000051985.1 | restriction endonuclease | - |
| VC395_RS20200 () | 375550..375690 | + | 141 | WP_001883049.1 | DUF3265 domain-containing protein | - |
| VC395_RS16050 () | 375802..376824 | + | 1023 | WP_000954291.1 | hypothetical protein | - |
| VC395_RS16055 () | 376865..377347 | + | 483 | WP_001900268.1 | hypothetical protein | - |
| VC395_RS16060 () | 377501..378505 | + | 1005 | WP_000964920.1 | LD-carboxypeptidase | - |
| VC395_RS16065 () | 378793..378975 | + | 183 | WP_000923182.1 | DUF645 family protein | - |
| VC395_RS16070 () | 379172..379597 | + | 426 | WP_000403005.1 | GNAT family N-acetyltransferase | - |
| VC395_RS16075 () | 379737..380327 | + | 591 | WP_000021480.1 | hypothetical protein | - |
| VC395_RS16080 () | 380481..380840 | + | 360 | WP_001071529.1 | VOC family protein | - |
| VC395_RS20210 () | 380977..381492 | + | 516 | Protein_361 | lipocalin family protein | - |
| VC395_RS16090 () | 381640..381936 | + | 297 | WP_000617998.1 | Dabb family protein | - |
| VC395_RS16100 () | 383075..383701 | + | 627 | WP_001889198.1 | hypothetical protein | - |
| VC395_RS16105 () | 383862..384869 | + | 1008 | WP_000093799.1 | DUF4365 domain-containing protein | - |
| VC395_RS20860 () | 384866..384976 | + | 111 | Protein_365 | DUF3265 domain-containing protein | - |
| VC395_RS16110 () | 385015..385401 | + | 387 | WP_000703163.1 | VOC family protein | - |
| VC395_RS16115 () | 385658..385861 | + | 204 | WP_001911580.1 | hypothetical protein | - |
| VC395_RS16120 () | 386056..386307 | + | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| VC395_RS20235 () | 386280..386429 | + | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| VC395_RS16125 () | 386456..386971 | + | 516 | WP_001201533.1 | lipocalin family protein | - |
| VC395_RS16130 () | 387274..387456 | + | 183 | WP_000947513.1 | DUF645 family protein | - |
| VC395_RS16135 () | 387665..388123 | + | 459 | WP_000650937.1 | hypothetical protein | - |
| VC395_RS16140 () | 388274..388636 | + | 363 | WP_000454151.1 | hypothetical protein | - |
| VC395_RS20625 () | 388636..388722 | + | 87 | WP_071917830.1 | DUF3265 domain-containing protein | - |
| VC395_RS16145 () | 388872..389297 | + | 426 | WP_000735184.1 | hypothetical protein | - |
| VC395_RS16150 () | 389511..389792 | + | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC395_RS16155 () | 389789..390076 | + | 288 | WP_000869999.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC395_RS16160 () | 390235..390774 | + | 540 | WP_000884561.1 | hydrolase | - |
| VC395_RS16165 () | 390909..391358 | + | 450 | WP_000480555.1 | hypothetical protein | - |
| VC395_RS16175 () | 391653..391835 | + | 183 | WP_001889223.1 | DUF645 family protein | - |
| VC395_RS16180 () | 392043..392735 | + | 693 | WP_000780703.1 | hypothetical protein | - |
| VC395_RS16185 () | 392735..393295 | + | 561 | Protein_382 | hypothetical protein | - |
| VC395_RS16190 () | 393410..393820 | + | 411 | WP_000452031.1 | hypothetical protein | - |
| VC395_RS16195 () | 393915..394340 | + | 426 | WP_000403003.1 | GNAT family N-acetyltransferase | - |
| VC395_RS16200 () | 394584..394820 | + | 237 | WP_001065132.1 | hypothetical protein | - |
| VC395_RS16210 () | 395426..395683 | + | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC395_RS16215 () | 395671..395973 | + | 303 | WP_000807826.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC395_RS16220 () | 396135..396716 | + | 582 | WP_001025027.1 | hypothetical protein | - |
| VC395_RS20265 () | 396707..396823 | + | 117 | WP_114732087.1 | DUF3265 domain-containing protein | - |
| VC395_RS20885 () | 396813..396965 | + | 153 | Protein_390 | DUF3709 domain-containing protein | - |
| VC395_RS16225 () | 396986..397207 | + | 222 | WP_032074688.1 | DUF3709 domain-containing protein | - |
| VC395_RS16230 () | 397547..397909 | + | 363 | WP_002034853.1 | hypothetical protein | - |
| VC395_RS16235 () | 398058..398984 | + | 927 | WP_000377815.1 | hypothetical protein | - |
| VC395_RS16240 () | 399124..399510 | + | 387 | WP_001015083.1 | MmcQ/YjbR family DNA-binding protein | - |
| VC395_RS20270 () | 399694..400017 | + | 324 | WP_001999495.1 | DUF3709 domain-containing protein | - |
| VC395_RS16245 () | 400303..400698 | + | 396 | WP_000870868.1 | DUF3465 domain-containing protein | - |
| VC395_RS16250 () | 400888..401109 | + | 222 | WP_043987927.1 | DUF1289 domain-containing protein | - |
| VC395_RS21040 () | 401473..401730 | + | 258 | WP_001889183.1 | hypothetical protein | - |
| VC395_RS20295 () | 402223..402456 | + | 234 | WP_001999499.1 | DUF3709 domain-containing protein | - |
| VC395_RS16260 () | 402645..403040 | + | 396 | WP_001889207.1 | DUF4144 domain-containing protein | - |
| VC395_RS16265 () | 403259..403648 | + | 390 | WP_000491261.1 | VOC family protein | - |
| VC395_RS16270 () | 403802..404659 | + | 858 | WP_000280037.1 | DUF2971 domain-containing protein | - |
| VC395_RS16280 () | 404955..405134 | + | 180 | WP_001889238.1 | DUF645 family protein | - |
| VC395_RS16285 () | 405328..405843 | + | 516 | WP_000343784.1 | dTDP-fucosamine acetyltransferase | VF |
| VC395_RS21045 () | 406140..406265 | + | 126 | WP_001944767.1 | DUF645 family protein | - |
| VC395_RS21050 () | 406281..406319 | + | 39 | WP_106019119.1 | hypothetical protein | - |
| VC395_RS16290 () | 406532..407536 | + | 1005 | WP_000964934.1 | LD-carboxypeptidase | - |
| VC395_RS16295 () | 407688..408134 | + | 447 | WP_000128977.1 | hypothetical protein | - |
| VC395_RS16300 () | 408254..409183 | + | 930 | WP_000335802.1 | hypothetical protein | - |
| VC395_RS20640 () | 409180..409290 | + | 111 | WP_071917832.1 | DUF3265 domain-containing protein | - |
| VC395_RS16305 () | 409318..409794 | + | 477 | WP_001047171.1 | GNAT family N-acetyltransferase | - |
| VC395_RS16310 () | 409931..410446 | + | 516 | WP_001201531.1 | lipocalin family protein | - |
| VC395_RS16315 () | 410582..410872 | - | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC395_RS16320 () | 410862..411110 | - | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC395_RS16335 () | 411681..412334 | + | 654 | WP_000036957.1 | site-specific DNA-methyltransferase | - |
| VC395_RS16340 () | 412605..413030 | + | 426 | WP_000415748.1 | hypothetical protein | - |
| VC395_RS16345 () | 413238..413633 | + | 396 | WP_000649527.1 | DUF3465 domain-containing protein | - |
| VC395_RS16350 () | 413784..414314 | + | 531 | WP_000415562.1 | hypothetical protein | - |
| VC395_RS16355 () | 414452..414952 | + | 501 | WP_000789723.1 | hypothetical protein | - |
| VC395_RS16360 () | 415108..415506 | + | 399 | WP_001882293.1 | hypothetical protein | - |
| VC395_RS16365 () | 415606..416070 | - | 465 | WP_000140244.1 | hypothetical protein | - |
| VC395_RS16370 () | 416453..417439 | - | 987 | WP_001170908.1 | Sulfate-binding protein | VF |
| VC395_RS16375 () | 417690..418268 | + | 579 | WP_001020575.1 | DJ-1/PfpI family protein | - |
| VC395_RS20345 () | 418572..418742 | + | 171 | WP_001882300.1 | DUF645 family protein | - |
| VC395_RS16380 () | 419065..419679 | + | 615 | WP_000789577.1 | hypothetical protein | - |
| VC395_RS16385 () | 419826..420683 | + | 858 | WP_001279526.1 | DUF2806 domain-containing protein | - |
| VC395_RS16390 () | 420839..421390 | + | 552 | WP_000821930.1 | hypothetical protein | - |
| VC395_RS21055 () | 421677..421880 | + | 204 | WP_001911745.1 | hypothetical protein | - |
| VC395_RS20925 () | 422161..422334 | + | 174 | WP_001882305.1 | DUF3709 domain-containing protein | - |
| VC395_RS16400 () | 422694..422963 | + | 270 | WP_001198131.1 | hypothetical protein | - |
| VC395_RS21115 () | 423281..423452 | + | 172 | Protein_431 | DUF645 family protein | - |
| VC395_RS20375 () | 423569..423683 | + | 115 | Protein_432 | acetyltransferase | - |
| VC395_RS16405 () | 423632..423859 | + | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| VC395_RS16415 () | 424200..424532 | + | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC395_RS16420 () | 424519..424833 | + | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| VC395_RS16425 () | 424970..425404 | + | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| VC395_RS21070 () | 425572..425727 | + | 156 | WP_000751734.1 | hypothetical protein | - |
| VC395_RS16435 () | 425852..426832 | - | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| VC395_RS16440 () | 426900..427172 | + | 273 | Protein_439 | Streptogramin A acetyltransferase | VF |
| VC395_RS16445 () | 427343..428035 | + | 693 | WP_001047169.1 | GNAT family N-acetyltransferase | Antitoxin Detail |
| VC395_RS16450 () | 428035..428436 | + | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| VC395_RS20655 () | 428406..428549 | + | 144 | WP_071908341.1 | DUF3265 domain-containing protein | - |
| VC395_RS16455 () | 428624..429037 | + | 414 | WP_000049417.1 | VOC family protein | - |
| VC395_RS16460 () | 429251..429502 | + | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC395_RS16465 () | 429492..429779 | + | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC395_RS16470 () | 429907..430362 | + | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| VC395_RS16475 () | 430684..430836 | + | 153 | WP_001884520.1 | DUF645 family protein | - |
| VC395_RS16480 () | 431092..431337 | - | 246 | WP_001912198.1 | hypothetical protein | - |
| VC395_RS16485 () | 431550..433298 | - | 1749 | WP_000063386.1 | hypothetical protein | - |
| VC395_RS16490 () | 433295..433630 | - | 336 | WP_000978438.1 | hypothetical protein | - |
| VC395_RS16495 () | 433934..434278 | - | 345 | WP_001912196.1 | hypothetical protein | - |
| VC395_RS16500 () | 434488..434964 | - | 477 | WP_000877543.1 | hypothetical protein | - |
| VC395_RS16505 () | 434976..435179 | - | 204 | WP_000784239.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|