MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 35904 bp
Accession: NC_004445 Location: 1..35904 Organism: Erwinia pyrifoliae Ep1/96 Replicon: plasmid pEP36
Accession: NC_004445 Location: 1..35904 Organism: Erwinia pyrifoliae Ep1/96 Replicon: plasmid pEP36
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS200_RS00005 (pEP36_001) | 13..990 | + | 978 | WP_011078049.1 | replication initiation protein | - |
| HS200_RS00010 | 1647..1794 | - | 148 | Protein_1 | IS3 family transposase | - |
| HS200_RS00015 (pEP36_002) | 1867..3078 | + | 1212 | WP_011078055.1 | IS256 family transposase ISEc39 | Transposase |
| HS200_RS00020 (pEP36_004) | 4289..4675 | - | 387 | WP_011078057.1 | H-NS family nucleoid-associated regulatory protein | - |
| HS200_RS00025 (pEP36_005) | 5459..6397 | - | 939 | WP_011078053.1 | Coagulase/fibrinolysin | VF |
| HS200_RS00030 (pEP36_006) | 6606..7463 | - | 858 | WP_011078076.1 | LysR family transcriptional regulator | - |
| HS200_RS00035 (pEP36_008) | 7530..8993 | + | 1464 | WP_250697897.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| HS200_RS00040 (pEP36_010) | 9293..10849 | - | 1557 | WP_173479934.1 | hypothetical protein | VF |
| HS200_RS00045 | 11357..11769 | - | 413 | Protein_8 | transcriptional regulator | - |
| HS200_RS00050 | 11770..12084 | - | 315 | WP_041473956.1 | type II toxin-antitoxin system HigB family toxin | - |
| HS200_RS00055 (pEP36_011) | 12348..12632 | - | 285 | WP_011078079.1 | VF530 family DNA-binding protein | - |
| HS200_RS00060 (pEP36_012) | 12792..13079 | - | 288 | WP_011078058.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HS200_RS00065 (pEP36_013) | 13069..13323 | - | 255 | WP_011078059.1 | plasmid stabilization protein | Antitoxin Detail |
| HS200_RS00070 (pEP36_014) | 13534..14499 | - | 966 | WP_011078060.1 | ThiF family adenylyltransferase | - |
| HS200_RS00075 (pEP36_015) | 14515..15273 | - | 759 | WP_173479937.1 | thiazole synthase | - |
| HS200_RS00080 | 15277..15474 | - | 198 | WP_012814637.1 | sulfur carrier protein ThiS | - |
| HS200_RS00085 (pEP36_016) | 15471..16403 | - | 933 | WP_041473952.1 | FAD-dependent oxidoreductase | - |
| HS200_RS00090 | 16779..16940 | - | 162 | Protein_17 | Txe/YoeB family addiction module toxin | - |
| HS200_RS00095 (pEP36_017) | 17120..17704 | + | 585 | WP_011078063.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| HS200_RS00100 (pEP36_018) | 18031..18690 | + | 660 | WP_041473951.1 | class I SAM-dependent methyltransferase | - |
| HS200_RS00105 (pEP36_019) | 19076..21106 | - | 2031 | WP_011078050.1 | choline transporter | - |
| HS200_RS00180 | 21621..21770 | + | 150 | WP_148217857.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HS200_RS00115 (pEP36_020) | 22745..23557 | - | 813 | WP_011078065.1 | Methionine-binding lipoprotein MetQ | VF |
| HS200_RS00120 (pEP36_021) | 23577..24245 | - | 669 | WP_011078066.1 | methionine ABC transporter permease | - |
| HS200_RS00125 (pEP36_022) | 24238..25218 | - | 981 | WP_011078067.1 | Methionine import ATP-binding protein MetN | VF |
| HS200_RS00130 (pEP36_023) | 25232..28228 | - | 2997 | WP_173479935.1 | Tn3 family transposase ISEc63 | Transposase |
| HS200_RS00135 (pEP36_024) | 28389..28970 | + | 582 | WP_011078073.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HS200_RS00185 | 28989..29178 | + | 190 | Protein_27 | hypothetical protein | - |
| HS200_RS00145 (pEP36_027) | 30421..31056 | + | 636 | Protein_29 | DUF4225 domain-containing protein | - |
| HS200_RS00150 (pEP36_028) | 31034..31363 | - | 330 | WP_041473955.1 | hypothetical protein | - |
| HS200_RS00155 (pEP36_029) | 32531..33067 | + | 537 | WP_011078070.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| HS200_RS00160 | 33171..33413 | + | 243 | Protein_32 | IS481 family transposase ISErsp1 | Transposase |
| HS200_RS00165 (pEP36_031) | 33836..34462 | + | 627 | WP_011078071.1 | Iron-sulfur cluster carrier protein | VF |
| HS200_RS00170 (pEP36_032) | 34459..34671 | + | 213 | WP_014540014.1 | plasmid partition protein ParG | - |
| HS200_RS00175 | 35284..35526 | + | 243 | WP_012814647.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia pyrifoliae Ep1/96 | Non-Mobilizable plasmid | TA24260, TA24261 | NC_013263 | 1..35909 | 0.003 | |
| Erwinia pyrifoliae strain EpK1/15 | Non-Mobilizable plasmid | TA81644, TA81645, TA81646 | NZ_CP023568 | 1..48456 | 0.004 | |
| Erwinia pyrifoliae strain CP201486 | Non-Mobilizable plasmid | TA255055, TA255056 | NZ_CP103446 | 1..34668 | 0.005 | |
| Erwinia pyrifoliae strain CP201179 | Non-Mobilizable plasmid | NZ_CP103451 | 1..34652 | 0.005 | ||
| Erwinia pyrifoliae strain CP20113301 | Non-Mobilizable plasmid | TA259101, TA259102 | NZ_CP104747 | 1..34637 | 0.004 |