Detailed information of regulator
Summary
| Regulator ID | REG0020  |
| Regulator type | ncRNA |
| Regulatory pathway (from literatures) | Unknown |
| KEGG pathway (determined by BlastKOALA) | - |
| Related T6SS | T6SS01061 (Type i1) |
| Strain | Vibrio cholerae 2740-80 |
| Replicon | chromosome |
| Sequence | - |
| Description | Inversion of SL2 (SL2*) but not SL1 (SL1*) or SL3 (SL3*) in V. harveyi Qrr4 eliminated T6SS repression as judged by the GFP reporter and V. cholerae 2740‐80 containing the Qrr4‐expressing plasmid showed ∼ 100‐fold higher survival from Pseudomonas aeruginosa T6SS attack than the strain harbouring the control plasmid. |
| Reference |
External database links
| Locus tag (Gene) | Qrr4 |
| Coordinates (Strand) | - |
| NCBI ID | - |
| RefSeq | NZ_CP016325 |
Target
| Target | Regulation (↓/↑) | Target sequence |
|---|---|---|
| VCA0107 mRNA | ↑ | GUAUAAUGCAGAGGUUAUGGAUACGGUUUGCAACAGUUACUUUGUCAACUAACUUUAGUAAGUU Putative base pairing between V. cholerae Qrr4 and the VCA0107 5′ UTR |