Detailed information of immunity protein
Summary
| Immunity protein ID | IMU00342  |
| Cognate effector | EFF01519 |
| Related T6SS (Type) | T6SS00367  (Type i1) |
| Strain | Escherichia coli O111:H- str. 11128 |
| Replicon | chromosome |
| Sequence | Protein sequence (122 a.a.); Nucleotide sequence (366 bp) |
| Description | - |
| Reference |
Experimental investigation has been performed. Bioinformatics investigation has been performedExternal database links
| Locus tag (Gene) | ECO111_0593 (CTI3) |
| Coordinates (Strand) | 632211..632576 (-) |
| NCBI ID | 446014673 |
| RefSeq | NC_013364 |
| Uniprot ID | K4XJR4_ECOLX, A0A0F3UVK4_ECOLX, I2ULF1_ECOLX |
| KEGG ID | - |
| PDB ID | - |
Pfam domain hit(s)
| Domain | Pfam ID | E-value | Aligned region |
|---|
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
| Prediction | Region | Sequence |
|---|---|---|
| Outside | 1-121 | MSRYILIRGWFECDFEQVKKIKEANEEFFKHSEKYLLPENTKRLYLNGWCYPEYPINWVSVISLGVNINQIAFDYIKDMIVNVSKTERLDGYFRVNDDEDNLFLEWIVKDGYLEEIILSGS |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
| Prediction | Probability | Cleavage site | Signal peptide sequence |
|---|---|---|---|
| Other | 0.9920 | - | - |
Protein sequence: 122 a.a. .
>IMU00342 NC_013364:c632576-632211 [Escherichia coli O111:H- str. 11128]
MSRYILIRGWFECDFEQVKKIKEANEEFFKHSEKYLLPENTKRLYLNGWCYPEYPINWVSVISLGVNINQIAFDYIKDMI
VNVSKTERLDGYFRVNDDEDNLFLEWIVKDGYLEEIILSGS*
MSRYILIRGWFECDFEQVKKIKEANEEFFKHSEKYLLPENTKRLYLNGWCYPEYPINWVSVISLGVNINQIAFDYIKDMI
VNVSKTERLDGYFRVNDDEDNLFLEWIVKDGYLEEIILSGS*
Nucleotide sequence: 366 bp .
>IMU00342 NC_013364:c632576-632211 [Escherichia coli O111:H- str. 11128]
ATGTCAAGATATATACTTATTAGAGGTTGGTTTGAGTGCGACTTTGAACAAGTAAAAAAAATAAAAGAAGCTAATGAAGA
ATTTTTCAAACATTCTGAAAAATATTTATTACCAGAAAACACGAAACGACTTTATTTAAATGGGTGGTGTTACCCAGAAT
ATCCTATCAACTGGGTTAGCGTTATTTCCTTAGGTGTTAATATAAATCAAATTGCATTTGATTATATAAAAGACATGATT
GTAAATGTTTCAAAAACTGAAAGATTGGATGGTTATTTTCGTGTGAATGATGATGAAGATAATTTATTCTTAGAATGGAT
TGTAAAAGATGGTTATTTAGAGGAAATAATTTTGTCTGGTTCATAA
ATGTCAAGATATATACTTATTAGAGGTTGGTTTGAGTGCGACTTTGAACAAGTAAAAAAAATAAAAGAAGCTAATGAAGA
ATTTTTCAAACATTCTGAAAAATATTTATTACCAGAAAACACGAAACGACTTTATTTAAATGGGTGGTGTTACCCAGAAT
ATCCTATCAACTGGGTTAGCGTTATTTCCTTAGGTGTTAATATAAATCAAATTGCATTTGATTATATAAAAGACATGATT
GTAAATGTTTCAAAAACTGAAAGATTGGATGGTTATTTTCGTGTGAATGATGATGAAGATAATTTATTCTTAGAATGGAT
TGTAAAAGATGGTTATTTAGAGGAAATAATTTTGTCTGGTTCATAA