Detailed information of immunity protein


Summary

Immunity protein ID IMU00325 experimental
Cognate effector EFF01807 experimental
Related T6SS (Type) T6SS00272 experimental (Type i1)
Strain Proteus mirabilis HI4320
Replicon chromosome
Sequence Protein sequence (321 a.a.); Nucleotide sequence (963 bp)
Description PefE protects from the toxicity of PefD
Reference
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed

External database links

Locus tag (Gene) PMI0756 (PefE)
Coordinates (Strand) 838672..839634 (+)
NCBI ID 501336093
RefSeq NC_010554
Uniprot ID B4EVA9_PROMH
KEGG ID pmr:PMI0756
PDB ID -

Pfam domain hit(s)

Domain Pfam ID E-value Aligned region

Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-320 MTYIKEKTWKEVLKGWIITGCAIRNKNIVYFCLRKDIPYEKARNLWNSEIPSMLLAIYLDTPVTPTGYASITGFDNPKVGVCLKPKEQGMLASRGDDGVVVCVGSGANLPPEKVMDGDYANPKNIKCVGGYAYYVGSARKIYKRVDIGKWQRIQHGIPGGETNTDMGFTDLDGFSEQDMYAVGGEGDVWHYNGEIWIPCGFPSNEQLSAVLCAPDGYVYIGGEGGSLWCGREYQWEKLYHGSSTILLNQLRWFEDKVWACDDYRLQCWNGKEMVRPKDGDKNVIASGHMDVRDGILVVADDYNVDLYDGTAWHKIVRPYK



Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.8056 - -



  Protein sequence: 321 a.a.    .

>IMU00325 NC_010554:838672-839634 [Proteus mirabilis HI4320]
MTYIKEKTWKEVLKGWIITGCAIRNKNIVYFCLRKDIPYEKARNLWNSEIPSMLLAIYLDTPVTPTGYASITGFDNPKVG
VCLKPKEQGMLASRGDDGVVVCVGSGANLPPEKVMDGDYANPKNIKCVGGYAYYVGSARKIYKRVDIGKWQRIQHGIPGG
ETNTDMGFTDLDGFSEQDMYAVGGEGDVWHYNGEIWIPCGFPSNEQLSAVLCAPDGYVYIGGEGGSLWCGREYQWEKLYH
GSSTILLNQLRWFEDKVWACDDYRLQCWNGKEMVRPKDGDKNVIASGHMDVRDGILVVADDYNVDLYDGTAWHKIVRPYK
*

  Nucleotide sequence: 963 bp    .

>IMU00325 NC_010554:838672-839634 [Proteus mirabilis HI4320]
ATGACATATATAAAAGAAAAAACTTGGAAAGAGGTTCTGAAAGGTTGGATAATTACTGGTTGTGCAATCCGAAATAAAAA
TATTGTGTACTTTTGTTTGCGCAAAGATATTCCATACGAAAAGGCTCGAAACTTATGGAACAGTGAAATACCTAGTATGT
TATTAGCTATCTATTTAGATACACCAGTCACACCTACAGGGTATGCGAGTATTACTGGATTTGATAATCCTAAAGTAGGT
GTTTGCTTAAAACCGAAAGAACAAGGGATGCTTGCATCTAGAGGTGATGATGGTGTTGTGGTGTGTGTAGGCAGTGGTGC
TAATTTGCCACCAGAAAAAGTTATGGATGGTGACTATGCAAACCCTAAAAATATTAAATGTGTTGGTGGATATGCTTATT
ATGTTGGCTCTGCACGCAAAATTTATAAACGTGTGGATATTGGGAAATGGCAGAGAATTCAACATGGGATACCAGGAGGA
GAAACCAATACAGATATGGGGTTCACTGATCTCGATGGTTTTTCTGAGCAGGATATGTATGCCGTTGGCGGTGAAGGCGA
TGTTTGGCATTATAATGGCGAAATCTGGATCCCCTGTGGTTTTCCCTCTAATGAGCAATTAAGTGCAGTTTTATGTGCCC
CTGATGGTTATGTGTATATTGGCGGTGAAGGGGGCAGTTTATGGTGTGGGCGTGAATATCAATGGGAAAAACTTTATCAC
GGCAGTTCGACTATTTTACTGAATCAGTTACGCTGGTTTGAAGATAAAGTGTGGGCATGTGATGACTACCGTTTACAGTG
TTGGAATGGTAAAGAAATGGTCCGTCCCAAGGATGGTGATAAAAATGTTATCGCCTCAGGTCATATGGATGTCCGCGATG
GGATTTTAGTTGTAGCTGATGATTATAATGTTGATCTGTATGATGGAACCGCTTGGCATAAGATAGTGAGACCTTATAAA
TAA