Detailed information of immunity protein


Summary

Immunity protein ID IMU00322 experimental
Cognate effector EFF01522 experimental
Related T6SS (Type) T6SS00944 experimental (Type Unknown)
Strain Escherichia coli strain PE086
Replicon chromosome
Sequence Protein sequence (95 a.a.); Nucleotide sequence (285 bp)
Description -
Reference
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) het3
Coordinates (Strand) 1861..2145 (+)
NCBI ID 1062685125
GenBank KX118289
Uniprot ID A0A061KX17_ECOLX
KEGG ID -
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
Colicin_Pyocin PF01320.20 1.7e-29 2..91
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-94 MFKEKLEDYTEEEFLNFLGGLRSSMKDGKPLKGKELEMYWDSLVDHFIEITQHPSGSDLIFYPKSQGDDKPENILKIVKEWRRSQGLPLFKDSK


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9911 - -


  Protein sequence: 95 a.a.    .

>IMU00322 KX118289:1861-2145 [Escherichia coli]
MFKEKLEDYTEEEFLNFLGGLRSSMKDGKPLKGKELEMYWDSLVDHFIEITQHPSGSDLIFYPKSQGDDKPENILKIVKE
WRRSQGLPLFKDSK*

  Nucleotide sequence: 285 bp    .

>IMU00322 KX118289:1861-2145 [Escherichia coli]
ATGTTTAAAGAAAAGCTCGAAGATTATACCGAGGAGGAATTTCTTAATTTTTTAGGTGGATTGAGATCATCTATGAAAGA
TGGAAAGCCATTAAAAGGTAAGGAGCTAGAAATGTACTGGGATTCATTAGTAGATCATTTTATTGAAATTACACAGCATC
CGTCAGGGAGCGATCTAATTTTCTACCCTAAAAGTCAAGGAGATGATAAGCCTGAAAACATCCTGAAAATTGTCAAAGAA
TGGCGGCGTTCACAGGGGTTACCCTTGTTTAAAGACTCTAAATAA