Detailed information of immunity protein


Summary

Immunity protein ID IMU00317 experimental
Cognate effector EFF01495 experimental
Related T6SS (Type) T6SS00234 insolico (Type i3)
Strain Serratia proteamaculans 568
Replicon chromosome
Sequence Protein sequence (367 a.a.); Nucleotide sequence (1101 bp)
Description Tre1 and Tri1 are an E-I pair and Tri1 can provide immunity against Tre1 via two structurally distinct mechanisms
Reference
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) Spro_3018 (Tri1)
Coordinates (Strand) 3322516..3323616 (+)
NCBI ID 501095675
RefSeq NC_009832
Uniprot ID TRE1_SERP5
KEGG ID spe:Spro_3017
PDB ID 6DRE, 6DRH
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
ADP_ribosyl_GH PF03747.16 1.3e-60 74..338
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Outside 1-366 MIDLREDTWTLQLYAQRYKGLSPKNSRELQLRMEYDPLKPNLPTSGEEQNSKPEWLNTPPCLIPESESLDKAKGALVGLAIGDAIGTTLEFLPRDKLHVNDMVGGGPFRLQPGEWTDDTSMALCLAESYISAGRLDITLFREKLVRWYRHGENSSNGRCFDIGNTTRNALEQYLKHGASWFGNTEPETAGNAAIIRQAPTSIFRRKSLQRTFADSDSQSMATHCAPESMASCQFLGFILNYLINGSSREKAFSPHVMPLPVRVLLINAGEYKEKKRDEIRSSGYVIDTLEAAMWAVWNTDNFHDAILLAANLGDDADSVAATTGQIAGALYGYSNIPKPWLDKLVQQERISNLAEQLFYMAPEEDF


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9847 - -


  Protein sequence: 367 a.a.    .

>IMU00317 NC_009832:3322516-3323616 [Serratia proteamaculans 568]
MIDLREDTWTLQLYAQRYKGLSPKNSRELQLRMEYDPLKPNLPTSGEEQNSKPEWLNTPPCLIPESESLDKAKGALVGLA
IGDAIGTTLEFLPRDKLHVNDMVGGGPFRLQPGEWTDDTSMALCLAESYISAGRLDITLFREKLVRWYRHGENSSNGRCF
DIGNTTRNALEQYLKHGASWFGNTEPETAGNAAIIRQAPTSIFRRKSLQRTFADSDSQSMATHCAPESMASCQFLGFILN
YLINGSSREKAFSPHVMPLPVRVLLINAGEYKEKKRDEIRSSGYVIDTLEAAMWAVWNTDNFHDAILLAANLGDDADSVA
ATTGQIAGALYGYSNIPKPWLDKLVQQERISNLAEQLFYMAPEEDF*

  Nucleotide sequence: 1101 bp    .

>IMU00317 NC_009832:3322516-3323616 [Serratia proteamaculans 568]
ATGATCGACTTACGTGAAGACACTTGGACATTGCAACTTTATGCTCAACGTTACAAGGGGTTATCCCCAAAGAACTCACG
CGAGCTACAATTGAGAATGGAATATGATCCTTTAAAGCCCAATTTGCCTACATCTGGAGAAGAGCAGAATAGCAAGCCAG
AATGGCTCAATACACCTCCCTGCTTAATTCCAGAAAGCGAATCACTAGATAAAGCCAAAGGTGCTTTAGTCGGTTTAGCT
ATAGGAGATGCTATTGGCACCACTCTTGAGTTTCTTCCTCGAGATAAGCTTCATGTTAACGATATGGTGGGTGGCGGCCC
ATTCAGGTTACAACCAGGCGAGTGGACAGACGATACCTCAATGGCTCTTTGTTTGGCAGAGAGTTATATTTCCGCAGGCC
GTTTAGATATTACTTTATTCCGCGAAAAATTAGTTCGCTGGTATCGCCACGGAGAAAATAGCTCAAACGGACGATGCTTT
GACATAGGAAATACAACCAGGAATGCTTTGGAACAATATTTAAAACACGGAGCGAGTTGGTTTGGGAATACAGAGCCTGA
AACTGCTGGTAATGCTGCAATAATACGACAGGCCCCCACATCAATTTTCAGAAGGAAATCACTACAACGAACATTTGCAG
ACTCAGACTCACAAAGCATGGCGACCCACTGTGCACCTGAATCTATGGCCAGCTGCCAATTTTTAGGTTTTATACTAAAT
TATCTAATTAATGGAAGCAGCAGAGAGAAAGCATTCTCACCACACGTCATGCCACTTCCAGTTAGAGTCCTATTAATAAA
TGCTGGCGAATACAAGGAAAAAAAACGTGACGAAATTCGTTCAAGTGGGTATGTAATAGACACTTTAGAAGCAGCAATGT
GGGCTGTGTGGAATACCGATAACTTCCACGATGCTATTTTACTTGCAGCAAACCTGGGTGATGATGCTGATAGTGTGGCC
GCTACAACTGGACAAATAGCAGGAGCACTATATGGATATTCAAACATCCCAAAACCATGGCTTGATAAGCTCGTCCAACA
AGAGAGAATATCTAATCTTGCTGAACAATTATTTTATATGGCTCCCGAAGAGGATTTTTAG