Detailed information of immunity protein
Summary
| Immunity protein ID | IMU00308  |
| Cognate effector | EFF01483 |
| Related T6SS (Type) | T6SS00127 (Type i1) |
| Strain | Myxococcus xanthus DK 1622 |
| Replicon | chromosome |
| Sequence | Protein sequence (195 a.a.); Nucleotide sequence (585 bp) |
| Description | MXAN_0049 protein was able to neutralise the toxicity of MXAN_0050 |
| Reference |
Experimental investigation has been performed.
Bioinformatics investigation has been performedExternal database links
| Locus tag (Gene) | MXAN_RS00260 |
| Coordinates (Strand) | 56489..57073 (-) |
| NCBI ID | 499869464 |
| RefSeq | NC_008095 |
| Uniprot ID | Q1DG91_MYXXD |
| KEGG ID | mxa:MXAN_0049 |
| PDB ID | 6A4C |
Pfam domain hit(s)
| Domain | Pfam ID | E-value | Aligned region |
|---|
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
| Prediction | Region | Sequence |
|---|---|---|
| Outside | 1-194 | VKYFVFKVMAEEAGYIEKLPNGSPTDWKFHEGISLAKDFPVGGEVSFSKNYPDNRNLYDFQPNIMSNLLVSGRARKLIESLGVTNAEWLPVAIKDHQGKVVGPDYAFLNLLGAEDAIDMERSEYEMDSLEKDQIGNIDALALDTSAIRPDAKMFRCTKERRLILIREDVHAAFEQAGLTGFKVYEAEGWDGLEL |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
| Prediction | Probability | Cleavage site | Signal peptide sequence |
|---|---|---|---|
| Other | 0.9633 | - | - |
Protein sequence: 195 a.a. .
>IMU00308 NC_008095:c57073-56489 [Myxococcus xanthus DK 1622]
VKYFVFKVMAEEAGYIEKLPNGSPTDWKFHEGISLAKDFPVGGEVSFSKNYPDNRNLYDFQPNIMSNLLVSGRARKLIES
LGVTNAEWLPVAIKDHQGKVVGPDYAFLNLLGAEDAIDMERSEYEMDSLEKDQIGNIDALALDTSAIRPDAKMFRCTKER
RLILIREDVHAAFEQAGLTGFKVYEAEGWDGLEL*
VKYFVFKVMAEEAGYIEKLPNGSPTDWKFHEGISLAKDFPVGGEVSFSKNYPDNRNLYDFQPNIMSNLLVSGRARKLIES
LGVTNAEWLPVAIKDHQGKVVGPDYAFLNLLGAEDAIDMERSEYEMDSLEKDQIGNIDALALDTSAIRPDAKMFRCTKER
RLILIREDVHAAFEQAGLTGFKVYEAEGWDGLEL*
Nucleotide sequence: 585 bp .
>IMU00308 NC_008095:c57073-56489 [Myxococcus xanthus DK 1622]
GTGAAATATTTTGTCTTCAAGGTCATGGCCGAAGAGGCGGGCTACATCGAGAAGCTTCCAAATGGCAGCCCTACTGATTG
GAAGTTCCACGAAGGCATCAGCCTTGCCAAAGATTTTCCAGTAGGCGGGGAAGTTTCGTTTTCAAAAAACTATCCCGACA
ATCGGAATCTCTATGATTTTCAACCCAATATCATGAGCAACCTGCTCGTCTCGGGACGGGCACGCAAGCTCATCGAGTCG
CTCGGTGTCACCAATGCCGAATGGCTTCCGGTCGCCATCAAGGACCATCAGGGCAAGGTCGTGGGTCCGGACTACGCTTT
CCTCAATCTCCTGGGTGCCGAAGACGCCATCGACATGGAACGCTCGGAGTACGAGATGGACTCCCTTGAGAAAGACCAAA
TCGGGAATATTGATGCGTTGGCTCTGGACACCAGCGCCATCCGTCCTGACGCGAAGATGTTCCGCTGCACGAAGGAACGC
CGTCTCATTCTCATCCGTGAAGACGTCCACGCTGCTTTCGAGCAAGCGGGCCTGACCGGCTTCAAGGTCTACGAAGCTGA
AGGCTGGGACGGACTGGAGCTCTGA
GTGAAATATTTTGTCTTCAAGGTCATGGCCGAAGAGGCGGGCTACATCGAGAAGCTTCCAAATGGCAGCCCTACTGATTG
GAAGTTCCACGAAGGCATCAGCCTTGCCAAAGATTTTCCAGTAGGCGGGGAAGTTTCGTTTTCAAAAAACTATCCCGACA
ATCGGAATCTCTATGATTTTCAACCCAATATCATGAGCAACCTGCTCGTCTCGGGACGGGCACGCAAGCTCATCGAGTCG
CTCGGTGTCACCAATGCCGAATGGCTTCCGGTCGCCATCAAGGACCATCAGGGCAAGGTCGTGGGTCCGGACTACGCTTT
CCTCAATCTCCTGGGTGCCGAAGACGCCATCGACATGGAACGCTCGGAGTACGAGATGGACTCCCTTGAGAAAGACCAAA
TCGGGAATATTGATGCGTTGGCTCTGGACACCAGCGCCATCCGTCCTGACGCGAAGATGTTCCGCTGCACGAAGGAACGC
CGTCTCATTCTCATCCGTGAAGACGTCCACGCTGCTTTCGAGCAAGCGGGCCTGACCGGCTTCAAGGTCTACGAAGCTGA
AGGCTGGGACGGACTGGAGCTCTGA