Detailed information of immunity protein


Summary

Immunity protein ID IMU00299 experimental
Cognate effector EFF01801 experimental
Related T6SS (Type) T6SS00061 experimental (Type i4b)
Strain Acinetobacter baylyi ADP1
Replicon chromosome
Sequence Protein sequence (363 a.a.); Nucleotide sequence (1089 bp)
Description Tsi1a
Reference
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) ACIAD1795 (Tsi1a)
Coordinates (Strand) 1802446..1803534 (+)
NCBI ID 50084943
RefSeq NC_005966
Uniprot ID UPI00003B784C
KEGG ID -
PDB ID -
Pfam domain hit(s)

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Domain
Pfam ID
E-value
Aligned region
No matching records found
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

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Prediction                
Region    
Sequence
Inside1-73MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVMDSWEFIRGRATAL
Transmembrane helix74-96ALPMWAALFFAISMFLFAIYSLY
Outside97-99FKQ
Transmembrane helix100-122VYWSIAIISCLTIGLVYLVYSNY
Inside123-267KMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELNWRDLRFSAVKEGDDIELRASLVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRKETFKESFERVYMVNDIVERVQQKRPKER
Transmembrane helix268-290YMLSVSLNIIFWLPTLFLRRLGL
Outside291-332LFSKIPEWPTHIEKECRIERNDTYDSTNKQRHLAPLKFSWAQ
Transmembrane helix333-355ILVIFLSGLILFSLAIVFFIGLA
Inside356-362YLSWNYR


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
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Prediction       
Probability
Cleavage site
Signal peptide sequence
Other0.9956--


  Protein sequence: 363 a.a.    .

>IMU00299 NC_005966:1802446-1803534 [Acinetobacter baylyi ADP1]
MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVMDSWEFIRGRATALALPMWAA
LFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYSNYKMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELN
WRDLRFSAVKEGDDIELRASLVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRKE
TFKESFERVYMVNDIVERVQQKRPKERYMLSVSLNIIFWLPTLFLRRLGLLFSKIPEWPTHIEKECRIERNDTYDSTNKQ
RHLAPLKFSWAQILVIFLSGLILFSLAIVFFIGLAYLSWNYR*

  Nucleotide sequence: 1089 bp    .

>IMU00299 NC_005966:1802446-1803534 [Acinetobacter baylyi ADP1]
ATGTTAAGAGAAGACTACGAAACCAAGTTTACGACACTCAATCAACCCTTTGAAATTGGGACTCCCAATAAAAACGGACG
TTTACGTTTAAGGGAGATTGATATAAAAAGCCTGAAAACGGATCAGCTTTATCCCCATCGTCAGGTTATTCGATTTAATT
CTACTTTTGTTGAGGTCATGGATAGTTGGGAGTTTATCCGTGGACGCGCAACAGCATTAGCACTTCCAATGTGGGCCGCA
TTATTTTTTGCGATTTCTATGTTTTTATTTGCTATATATAGCCTGTATTTTAAACAGGTTTATTGGAGTATCGCTATAAT
TTCGTGCCTAACGATTGGTTTGGTTTATTTAGTCTATTCGAATTATAAGATGGCAAAGTATGATTTATTTGGCTATACCC
ATTATCCAATTCGTTTTAATCAGAAAACCCAGAAAGTATATGCTTTTTCTCCTCAACAACAAAAAATGATTGAGTTAAAT
TGGCGAGATTTACGCTTCTCAGCAGTTAAAGAGGGTGATGATATAGAATTAAGGGCAAGTTTAGTAAATGCGGATAATAT
TGTAGAGGAAGAAATTATTTTTCCTTTTTTAGCACCAAGATATCAACCTGAATTAGTTGATCAGCATTTAGCTTTTTTTA
AAGCTTATATGCAAGGTGGTGATCTAAAAAGAATTGATGCAGCTATTCCAGAGTTCTTTGATATTTATAATAGAAAAGAA
ACTTTTAAAGAGAGCTTTGAACGAGTTTATATGGTTAATGATATCGTAGAAAGGGTACAACAAAAGAGACCAAAGGAAAG
GTATATGTTGTCCGTATCATTAAATATTATATTTTGGCTGCCAACATTATTTTTAAGACGTTTAGGATTGTTATTTTCAA
AAATACCTGAATGGCCTACCCATATTGAAAAAGAATGTCGTATTGAAAGAAATGATACCTACGACTCGACAAATAAGCAG
CGTCATCTTGCACCTTTAAAGTTTAGTTGGGCACAGATTTTAGTTATATTTTTAAGTGGATTAATTCTATTTAGTCTGGC
TATTGTATTTTTTATAGGGCTTGCATATCTAAGTTGGAACTATAGATAA