Detailed information of immunity protein


Summary

Immunity protein ID IMU00299 experimental
Cognate effector EFF01801 experimental
Related T6SS (Type) T6SS00061 experimental (Type i4b)
Strain Acinetobacter baylyi ADP1
Replicon chromosome
Sequence Protein sequence (363 a.a.); Nucleotide sequence (1089 bp)
Description Tsi1a
Reference
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) ACIAD1795 (Tsi1a)
Coordinates (Strand) 1802446..1803534 (+)
NCBI ID 50084943
RefSeq NC_005966
Uniprot ID UPI00003B784C
KEGG ID -
PDB ID -
Pfam domain hit(s)

Domain Pfam ID E-value Aligned region
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

Prediction                 Region     Sequence
Inside 1-73 MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVMDSWEFIRGRATAL
Transmembrane helix 74-96 ALPMWAALFFAISMFLFAIYSLY
Outside 97-99 FKQ
Transmembrane helix 100-122 VYWSIAIISCLTIGLVYLVYSNY
Inside 123-267 KMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELNWRDLRFSAVKEGDDIELRASLVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRKETFKESFERVYMVNDIVERVQQKRPKER
Transmembrane helix 268-290 YMLSVSLNIIFWLPTLFLRRLGL
Outside 291-332 LFSKIPEWPTHIEKECRIERNDTYDSTNKQRHLAPLKFSWAQ
Transmembrane helix 333-355 ILVIFLSGLILFSLAIVFFIGLA
Inside 356-362 YLSWNYR


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
Prediction        Probability Cleavage site Signal peptide sequence
Other 0.9956 - -


  Protein sequence: 363 a.a.    .

>IMU00299 NC_005966:1802446-1803534 [Acinetobacter baylyi ADP1]
MLREDYETKFTTLNQPFEIGTPNKNGRLRLREIDIKSLKTDQLYPHRQVIRFNSTFVEVMDSWEFIRGRATALALPMWAA
LFFAISMFLFAIYSLYFKQVYWSIAIISCLTIGLVYLVYSNYKMAKYDLFGYTHYPIRFNQKTQKVYAFSPQQQKMIELN
WRDLRFSAVKEGDDIELRASLVNADNIVEEEIIFPFLAPRYQPELVDQHLAFFKAYMQGGDLKRIDAAIPEFFDIYNRKE
TFKESFERVYMVNDIVERVQQKRPKERYMLSVSLNIIFWLPTLFLRRLGLLFSKIPEWPTHIEKECRIERNDTYDSTNKQ
RHLAPLKFSWAQILVIFLSGLILFSLAIVFFIGLAYLSWNYR*

  Nucleotide sequence: 1089 bp    .

>IMU00299 NC_005966:1802446-1803534 [Acinetobacter baylyi ADP1]
ATGTTAAGAGAAGACTACGAAACCAAGTTTACGACACTCAATCAACCCTTTGAAATTGGGACTCCCAATAAAAACGGACG
TTTACGTTTAAGGGAGATTGATATAAAAAGCCTGAAAACGGATCAGCTTTATCCCCATCGTCAGGTTATTCGATTTAATT
CTACTTTTGTTGAGGTCATGGATAGTTGGGAGTTTATCCGTGGACGCGCAACAGCATTAGCACTTCCAATGTGGGCCGCA
TTATTTTTTGCGATTTCTATGTTTTTATTTGCTATATATAGCCTGTATTTTAAACAGGTTTATTGGAGTATCGCTATAAT
TTCGTGCCTAACGATTGGTTTGGTTTATTTAGTCTATTCGAATTATAAGATGGCAAAGTATGATTTATTTGGCTATACCC
ATTATCCAATTCGTTTTAATCAGAAAACCCAGAAAGTATATGCTTTTTCTCCTCAACAACAAAAAATGATTGAGTTAAAT
TGGCGAGATTTACGCTTCTCAGCAGTTAAAGAGGGTGATGATATAGAATTAAGGGCAAGTTTAGTAAATGCGGATAATAT
TGTAGAGGAAGAAATTATTTTTCCTTTTTTAGCACCAAGATATCAACCTGAATTAGTTGATCAGCATTTAGCTTTTTTTA
AAGCTTATATGCAAGGTGGTGATCTAAAAAGAATTGATGCAGCTATTCCAGAGTTCTTTGATATTTATAATAGAAAAGAA
ACTTTTAAAGAGAGCTTTGAACGAGTTTATATGGTTAATGATATCGTAGAAAGGGTACAACAAAAGAGACCAAAGGAAAG
GTATATGTTGTCCGTATCATTAAATATTATATTTTGGCTGCCAACATTATTTTTAAGACGTTTAGGATTGTTATTTTCAA
AAATACCTGAATGGCCTACCCATATTGAAAAAGAATGTCGTATTGAAAGAAATGATACCTACGACTCGACAAATAAGCAG
CGTCATCTTGCACCTTTAAAGTTTAGTTGGGCACAGATTTTAGTTATATTTTTAAGTGGATTAATTCTATTTAGTCTGGC
TATTGTATTTTTTATAGGGCTTGCATATCTAAGTTGGAACTATAGATAA