Detailed information of immunity protein
Summary
| Immunity protein ID | IMU00293  |
| Cognate effector | EFF01469 |
| Related T6SS (Type) | T6SS00061 (Type i4b) |
| Strain | Acinetobacter baylyi ADP1 |
| Replicon | chromosome |
| Sequence | Protein sequence (151 a.a.); Nucleotide sequence (453 bp) |
| Description | The protein encoded downstream of Tpe1, Tpi1 (ACIAD0054), contains a predicted N-terminal transmembrane helix, and it is the cognate immunity protein to Tpe1. |
| Reference |
Experimental investigation has been performed.
Bioinformatics investigation has been performedExternal database links
| Locus tag (Gene) | ACIAD0054 (Tpi1) |
| Coordinates (Strand) | 56618..57070 (+) |
| NCBI ID | 50083348 |
| RefSeq | NC_005966 |
| Uniprot ID | UPI00003B726A |
| KEGG ID | - |
| PDB ID | - |
Pfam domain hit(s)
| Domain | Pfam ID | E-value | Aligned region |
|---|
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
| Prediction | Region | Sequence |
|---|---|---|
| Inside | 1-6 | MNMKEK |
| Transmembrane helix | 7-26 | KIVGYIIIGFFLIYIISFFI |
| Outside | 27-150 | RNENEKFTISLVNNNLLIKFPNKIFVKDYAIKDYEETNQSNINKIFEYKTILEKEYYQEVNEVFIRDISNYGIKENHAYFYTMFQEDNKNSSKKLKSLGFCIKKDFVLVQGSREKDSDFINKCH |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
| Prediction | Probability | Cleavage site | Signal peptide sequence |
|---|---|---|---|
| Other | 0.9932 | - | - |
Protein sequence: 151 a.a. .
>IMU00293 NC_005966:56618-57070 [Acinetobacter baylyi ADP1]
MNMKEKKIVGYIIIGFFLIYIISFFIRNENEKFTISLVNNNLLIKFPNKIFVKDYAIKDYEETNQSNINKIFEYKTILEK
EYYQEVNEVFIRDISNYGIKENHAYFYTMFQEDNKNSSKKLKSLGFCIKKDFVLVQGSREKDSDFINKCH*
MNMKEKKIVGYIIIGFFLIYIISFFIRNENEKFTISLVNNNLLIKFPNKIFVKDYAIKDYEETNQSNINKIFEYKTILEK
EYYQEVNEVFIRDISNYGIKENHAYFYTMFQEDNKNSSKKLKSLGFCIKKDFVLVQGSREKDSDFINKCH*
Nucleotide sequence: 453 bp .
>IMU00293 NC_005966:56618-57070 [Acinetobacter baylyi ADP1]
ATGAACATGAAAGAAAAAAAAATAGTTGGATATATCATTATAGGATTTTTTTTAATTTATATTATTTCTTTTTTCATTAG
GAATGAGAATGAAAAATTTACTATTAGCCTTGTTAATAATAATCTATTGATTAAATTTCCTAATAAGATATTTGTTAAAG
ATTATGCAATAAAGGACTATGAGGAAACTAATCAATCAAATATCAATAAAATATTTGAGTACAAAACAATTTTGGAAAAA
GAATACTATCAAGAAGTTAATGAAGTTTTTATAAGAGATATATCAAATTATGGTATTAAAGAAAATCATGCTTATTTCTA
TACTATGTTTCAAGAGGATAATAAAAACTCTAGTAAAAAATTAAAATCACTCGGCTTCTGTATAAAAAAAGATTTTGTTC
TCGTACAGGGTAGTAGGGAAAAAGATAGTGACTTTATAAACAAGTGCCATTAA
ATGAACATGAAAGAAAAAAAAATAGTTGGATATATCATTATAGGATTTTTTTTAATTTATATTATTTCTTTTTTCATTAG
GAATGAGAATGAAAAATTTACTATTAGCCTTGTTAATAATAATCTATTGATTAAATTTCCTAATAAGATATTTGTTAAAG
ATTATGCAATAAAGGACTATGAGGAAACTAATCAATCAAATATCAATAAAATATTTGAGTACAAAACAATTTTGGAAAAA
GAATACTATCAAGAAGTTAATGAAGTTTTTATAAGAGATATATCAAATTATGGTATTAAAGAAAATCATGCTTATTTCTA
TACTATGTTTCAAGAGGATAATAAAAACTCTAGTAAAAAATTAAAATCACTCGGCTTCTGTATAAAAAAAGATTTTGTTC
TCGTACAGGGTAGTAGGGAAAAAGATAGTGACTTTATAAACAAGTGCCATTAA