Detailed information of immunity protein
Summary
| Immunity protein ID | IMU00071  |
| Cognate effector | EFF00140 |
| Related T6SS (Type) | T6SS00115 (Type i4b) |
| Strain | Burkholderia thailandensis E264 |
| Replicon | chromosome |
| Sequence | Protein sequence (132 a.a.); Nucleotide sequence (396 bp) |
| Description | Tai2 |
| Reference | - |
Experimental investigation has been performed.
Bioinformatics investigation has been performedExternal database links
| Locus tag (Gene) | BTH_I0069 (Tai2) |
| Coordinates (Strand) | 74394..74789 (+) |
| NCBI ID | 83719910 |
| RefSeq | NC_007651 |
| Uniprot ID | UPI00006680F0 |
| KEGG ID | - |
| PDB ID | - |
Pfam domain hit(s)
| Domain | Pfam ID | E-value | Aligned region |
|---|
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
| Prediction | Region | Sequence |
|---|---|---|
| Outside | 1-131 | MSWSKAACALAAASFFGCAGASGTADATGATGAAGAARAGTAVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERKGHWELGYVYDAGRYVTIRCKYADGQTKDVRLAERVNRCDYRIDGKKTLKVTCRK |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
| Prediction | Probability | Cleavage site | Signal peptide sequence |
|---|---|---|---|
| LIPO(Sec/SPII) | 0.8837 | pos: 17-18. FFG-CA. | MSWSKAACALAAASFFG |
Protein sequence: 132 a.a. .
>IMU00071 NC_007651:74394-74789 [Burkholderia thailandensis E264]
MSWSKAACALAAASFFGCAGASGTADATGATGAAGAARAGTAVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERKGHW
ELGYVYDAGRYVTIRCKYADGQTKDVRLAERVNRCDYRIDGKKTLKVTCRK*
MSWSKAACALAAASFFGCAGASGTADATGATGAAGAARAGTAVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERKGHW
ELGYVYDAGRYVTIRCKYADGQTKDVRLAERVNRCDYRIDGKKTLKVTCRK*
Nucleotide sequence: 396 bp .
>IMU00071 NC_007651:74394-74789 [Burkholderia thailandensis E264]
ATGTCGTGGAGTAAGGCCGCCTGCGCACTCGCCGCCGCGTCGTTCTTCGGATGCGCGGGCGCGTCGGGCACGGCGGACGC
GACCGGTGCGACCGGTGCGGCCGGCGCAGCCCGTGCGGGCACGGCAGTCTGCCCGGTGCGGGCGCAAAGCCCGCTGCAAT
ACGTCGACGTATTCGACGGCGCGCCGAGCGATCTCGCGACGCTGATTCCCGACGACGCCGGCGAGCGCAAGGGGCATTGG
GAGCTGGGCTACGTGTACGACGCGGGACGCTACGTGACGATCCGCTGCAAGTACGCGGACGGCCAGACGAAGGACGTCAG
GCTCGCCGAGCGCGTGAATCGCTGCGATTACCGGATCGACGGCAAGAAGACGCTGAAGGTGACGTGCAGGAAATGA
ATGTCGTGGAGTAAGGCCGCCTGCGCACTCGCCGCCGCGTCGTTCTTCGGATGCGCGGGCGCGTCGGGCACGGCGGACGC
GACCGGTGCGACCGGTGCGGCCGGCGCAGCCCGTGCGGGCACGGCAGTCTGCCCGGTGCGGGCGCAAAGCCCGCTGCAAT
ACGTCGACGTATTCGACGGCGCGCCGAGCGATCTCGCGACGCTGATTCCCGACGACGCCGGCGAGCGCAAGGGGCATTGG
GAGCTGGGCTACGTGTACGACGCGGGACGCTACGTGACGATCCGCTGCAAGTACGCGGACGGCCAGACGAAGGACGTCAG
GCTCGCCGAGCGCGTGAATCGCTGCGATTACCGGATCGACGGCAAGAAGACGCTGAAGGTGACGTGCAGGAAATGA