Detailed information of immunity protein


Summary

Immunity protein ID IMU00071 experimental
Cognate effector EFF00140 experimental
Related T6SS (Type) T6SS00115 experimental (Type i4b)
Strain Burkholderia thailandensis E264
Replicon chromosome
Sequence Protein sequence (132 a.a.); Nucleotide sequence (396 bp)
Description Tai2
Reference
-
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
External database links

Locus tag (Gene) BTH_I0069 (Tai2)
Coordinates (Strand) 74394..74789 (+)
NCBI ID 83719910
RefSeq NC_007651
Uniprot ID UPI00006680F0
KEGG ID -
PDB ID -
Pfam domain hit(s)

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Domain
Pfam ID
E-value
Aligned region
No matching records found
Transmembrane helices

  • Transmembrane helices are predicted using TMHMM 2.0 software.

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Prediction                
Region    
Sequence
Outside1-131MSWSKAACALAAASFFGCAGASGTADATGATGAAGAARAGTAVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERKGHWELGYVYDAGRYVTIRCKYADGQTKDVRLAERVNRCDYRIDGKKTLKVTCRK


Signal peptides
  • Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
  • Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
  • Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
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Prediction       
Probability
Cleavage site
Signal peptide sequence
LIPO(Sec/SPII)0.8837pos: 17-18. FFG-CA.MSWSKAACALAAASFFG


  Protein sequence: 132 a.a.    .

>IMU00071 NC_007651:74394-74789 [Burkholderia thailandensis E264]
MSWSKAACALAAASFFGCAGASGTADATGATGAAGAARAGTAVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERKGHW
ELGYVYDAGRYVTIRCKYADGQTKDVRLAERVNRCDYRIDGKKTLKVTCRK*

  Nucleotide sequence: 396 bp    .

>IMU00071 NC_007651:74394-74789 [Burkholderia thailandensis E264]
ATGTCGTGGAGTAAGGCCGCCTGCGCACTCGCCGCCGCGTCGTTCTTCGGATGCGCGGGCGCGTCGGGCACGGCGGACGC
GACCGGTGCGACCGGTGCGGCCGGCGCAGCCCGTGCGGGCACGGCAGTCTGCCCGGTGCGGGCGCAAAGCCCGCTGCAAT
ACGTCGACGTATTCGACGGCGCGCCGAGCGATCTCGCGACGCTGATTCCCGACGACGCCGGCGAGCGCAAGGGGCATTGG
GAGCTGGGCTACGTGTACGACGCGGGACGCTACGTGACGATCCGCTGCAAGTACGCGGACGGCCAGACGAAGGACGTCAG
GCTCGCCGAGCGCGTGAATCGCTGCGATTACCGGATCGACGGCAAGAAGACGCTGAAGGTGACGTGCAGGAAATGA