Detailed information of immunity protein
Summary
| Immunity protein ID | IMU00055  |
| Cognate effector | EFF01254 |
| Related T6SS (Type) | T6SS00395 (Type i3) |
| Strain | Enterobacter cloacae subsp. cloacae ATCC 13047 |
| Replicon | chromosome |
| Sequence | Protein sequence (333 a.a.); Nucleotide sequence (999 bp) |
| Description | rhsIA |
| Reference | - |
Experimental investigation has been performed.
Bioinformatics investigation has been performedExternal database links
| Locus tag (Gene) | ECL_01568 (RhsIA) |
| Coordinates (Strand) | 1595931..1596929 (+) |
| NCBI ID | 296101930 |
| RefSeq | NC_014121 |
| Uniprot ID | A0A0H3CJ03_ENTCC |
| KEGG ID | enc:ECL_01568 |
| PDB ID | - |
Pfam domain hit(s)
| Domain | Pfam ID | E-value | Aligned region |
|---|
Transmembrane helices
- Transmembrane helices are predicted using TMHMM 2.0 software.
| Prediction | Region | Sequence |
|---|---|---|
| Outside | 1-332 | MIFEMFLHKIEHFTNARAEIESFGKYIYIQDEPDLFPVCFKKENGKHAELSRWQNCFPKATLQRALNKLDLSDGEKYAFEVLLSRLGYLFQIDNRQRIDKDIFILFYVYQLVSLKNNKKDYSIKAKNYFLKFLCFEMGMDDDSYKLLCITNDGLCINTTQHGAVSVLSLLEKFYAQFENKKNLEDIKSIKHYQSSVLNFLFTHDDSNYHLFFNDANCYLSDPENFINTYIKSKKTIYKALEQCFDKYQSTKNLLISNFILMNYSYYIVRGNLADLKTLKKYISSEVFGKIISAILYRGFFVDEEKVLKVVGDEYKSGLESEDRKLFNLIYSI |
Signal peptides
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
| Prediction | Probability | Cleavage site | Signal peptide sequence |
|---|---|---|---|
| Other | 0.9713 | - | - |
Protein sequence: 333 a.a. .
>IMU00055 NC_014121:1595931-1596929 [Enterobacter cloacae subsp. cloacae ATCC 13047]
MIFEMFLHKIEHFTNARAEIESFGKYIYIQDEPDLFPVCFKKENGKHAELSRWQNCFPKATLQRALNKLDLSDGEKYAFE
VLLSRLGYLFQIDNRQRIDKDIFILFYVYQLVSLKNNKKDYSIKAKNYFLKFLCFEMGMDDDSYKLLCITNDGLCINTTQ
HGAVSVLSLLEKFYAQFENKKNLEDIKSIKHYQSSVLNFLFTHDDSNYHLFFNDANCYLSDPENFINTYIKSKKTIYKAL
EQCFDKYQSTKNLLISNFILMNYSYYIVRGNLADLKTLKKYISSEVFGKIISAILYRGFFVDEEKVLKVVGDEYKSGLES
EDRKLFNLIYSI*
MIFEMFLHKIEHFTNARAEIESFGKYIYIQDEPDLFPVCFKKENGKHAELSRWQNCFPKATLQRALNKLDLSDGEKYAFE
VLLSRLGYLFQIDNRQRIDKDIFILFYVYQLVSLKNNKKDYSIKAKNYFLKFLCFEMGMDDDSYKLLCITNDGLCINTTQ
HGAVSVLSLLEKFYAQFENKKNLEDIKSIKHYQSSVLNFLFTHDDSNYHLFFNDANCYLSDPENFINTYIKSKKTIYKAL
EQCFDKYQSTKNLLISNFILMNYSYYIVRGNLADLKTLKKYISSEVFGKIISAILYRGFFVDEEKVLKVVGDEYKSGLES
EDRKLFNLIYSI*
Nucleotide sequence: 999 bp .
>IMU00055 NC_014121:1595931-1596929 [Enterobacter cloacae subsp. cloacae ATCC 13047]
ATGATTTTTGAAATGTTTCTACATAAAATTGAACACTTCACTAATGCGAGAGCAGAGATTGAAAGTTTTGGGAAATATAT
CTACATTCAGGATGAACCGGACCTTTTCCCCGTTTGTTTTAAAAAAGAAAATGGAAAGCATGCAGAATTAAGTCGTTGGC
AAAATTGTTTCCCTAAAGCTACGTTACAGCGTGCATTGAATAAGTTAGACTTAAGTGATGGTGAGAAATATGCATTTGAA
GTTCTCCTTTCTCGATTAGGTTATCTGTTTCAAATAGATAACCGACAGCGTATAGATAAAGATATCTTTATATTGTTTTA
TGTATATCAGCTCGTTTCTTTAAAAAATAACAAGAAAGATTACTCAATAAAAGCAAAAAACTACTTTTTAAAATTTTTGT
GTTTTGAAATGGGTATGGATGATGACTCATATAAATTGCTTTGCATTACTAATGATGGGTTGTGTATAAATACTACTCAG
CATGGTGCTGTATCAGTATTGTCATTGCTTGAGAAATTTTATGCACAATTTGAAAACAAGAAAAACCTTGAAGACATTAA
GTCTATAAAGCATTATCAATCATCGGTATTGAATTTCCTATTTACTCACGATGACAGCAATTACCATCTGTTTTTTAATG
ATGCGAATTGCTATCTTAGCGATCCTGAAAATTTTATTAATACATATATAAAATCCAAAAAGACAATATATAAAGCTTTG
GAGCAGTGTTTTGACAAGTATCAATCTACAAAGAATCTACTAATATCAAATTTCATCCTAATGAATTACTCTTATTACAT
TGTTAGAGGTAATTTGGCAGATCTTAAAACTTTAAAAAAATATATTTCTTCAGAAGTATTTGGAAAAATAATTTCTGCTA
TATTATACAGAGGTTTTTTTGTGGATGAAGAAAAAGTACTCAAGGTAGTTGGTGATGAATATAAATCTGGACTTGAAAGT
GAAGATAGGAAGTTATTTAATTTAATATATTCGATTTAA
ATGATTTTTGAAATGTTTCTACATAAAATTGAACACTTCACTAATGCGAGAGCAGAGATTGAAAGTTTTGGGAAATATAT
CTACATTCAGGATGAACCGGACCTTTTCCCCGTTTGTTTTAAAAAAGAAAATGGAAAGCATGCAGAATTAAGTCGTTGGC
AAAATTGTTTCCCTAAAGCTACGTTACAGCGTGCATTGAATAAGTTAGACTTAAGTGATGGTGAGAAATATGCATTTGAA
GTTCTCCTTTCTCGATTAGGTTATCTGTTTCAAATAGATAACCGACAGCGTATAGATAAAGATATCTTTATATTGTTTTA
TGTATATCAGCTCGTTTCTTTAAAAAATAACAAGAAAGATTACTCAATAAAAGCAAAAAACTACTTTTTAAAATTTTTGT
GTTTTGAAATGGGTATGGATGATGACTCATATAAATTGCTTTGCATTACTAATGATGGGTTGTGTATAAATACTACTCAG
CATGGTGCTGTATCAGTATTGTCATTGCTTGAGAAATTTTATGCACAATTTGAAAACAAGAAAAACCTTGAAGACATTAA
GTCTATAAAGCATTATCAATCATCGGTATTGAATTTCCTATTTACTCACGATGACAGCAATTACCATCTGTTTTTTAATG
ATGCGAATTGCTATCTTAGCGATCCTGAAAATTTTATTAATACATATATAAAATCCAAAAAGACAATATATAAAGCTTTG
GAGCAGTGTTTTGACAAGTATCAATCTACAAAGAATCTACTAATATCAAATTTCATCCTAATGAATTACTCTTATTACAT
TGTTAGAGGTAATTTGGCAGATCTTAAAACTTTAAAAAAATATATTTCTTCAGAAGTATTTGGAAAAATAATTTCTGCTA
TATTATACAGAGGTTTTTTTGTGGATGAAGAAAAAGTACTCAAGGTAGTTGGTGATGAATATAAATCTGGACTTGAAAGT
GAAGATAGGAAGTTATTTAATTTAATATATTCGATTTAA