Detailed information of effector
|Cognate immunity protein||IMU38211|
|Related T6SS (Type)||T6SS00126 (Type i4b)|
|Strain||Burkholderia cenocepacia AU 1054|
|Sequence||Protein sequence ( a.a.); Nucleotide sequence ( bp)|
|Description||The E-I deletion mutant was outcompeted by its parental strain in a T6SS-dependent manner. Ectopic expression of the cognate immunity gene in each mutant rescued it from T6SS-mediated killing by the parental strain, providing evidence that Tle1-Tli1, Tne1-Tni1, Tne2-Tni2, and Tpe1-Tpi1 are true antibacterial E-I pairs associated with the BcAU1054 T6SS.|
Bioinformatics investigation has been performed
External database links
|Locus tag (Gene)||BCEN_RS13180 (tne1)|
|Coordinates (Strand)||2911927..2916584 (-)|
Pfam domain hit(s)
|Domain||Pfam ID||E-value||Aligned region|
- Transmembrane helices are predicted using TMHMM 2.0 software.
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
|Prediction||Probability||Cleavage site||Signal peptide sequence|
Protein sequence: a.a. .
Nucleotide sequence: bp .