Detailed information of effector
|Cognate immunity protein||IMU00385|
|Related T6SS (Type)||T6SS01301 (Type i3)|
|Strain||Burkholderia gladioli NGJ1|
|Sequence||Protein sequence (239 a.a.); Nucleotide sequence (717 bp)|
|Description||The TseTBg effector proteins of NGJ1 harbor potent DNase and RNase activity. Treatment of TseTBg1/TseTBg2 proteins completely degraded the pHM1 plasmid (isolated from E. coli), but failed to degrade it when isolated from NGJ1. And plasmid (pET28a) isolated from Dam-expressing E. coli cells was not degraded by either of TseTBg1/TseTBg2 proteins. However, plasmid isolated from cells that do not express Dam protein was completely degraded by both of them.|
Bioinformatics investigation has been performed
External database links
|Locus tag (Gene)||AC179_RS29610 (Hcp-2)|
|Coordinates (Strand)||22675..23391 (-)|
Pfam domain hit(s)
|Domain||Pfam ID||E-value||Aligned region|
- Transmembrane helices are predicted using TMHMM 2.0 software.
- Sec/SPI: "standard" secretory signal peptides transported by the Sec translocon and cleaved by Signal Peptidase I (Lep).
- Sec/SPII: lipoprotein signal peptides transported by the Sec translocon and cleaved by Signal Peptidase II (Lsp).
- Tat/SPI: Tat signal peptides transported by the Tat translocon and cleaved by Signal Peptidase I (Lep).
|Prediction||Probability||Cleavage site||Signal peptide sequence|
Protein sequence: 239 a.a. .
Nucleotide sequence: 717 bp .