Aliivibrio fischeri strain FQ-A001
Experimental investigation has been performed.
Bioinformatics investigation has been performed
T6SS ID | Type | Organism | Replicon (Accession) | Location | Function |
---|---|---|---|---|---|
T6SS01277 | i1 | Aliivibrio fischeri strain FQ-A001 | chromosome (NZ_SJSX01000002) | 747470..766109 | anti-bacterial |
T6SS01278 | i1 | Aliivibrio fischeri strain FQ-A001 | chromosome (NZ_SJSX01000004) | 316834..358016 | anti-bacterial |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Regulator ID | Locus tag (Gene) | Related T6SS | Regulator type | Regulatory pathway | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID | Target (Regulation) |
---|---|---|---|---|---|---|---|---|---|
REG0124 | VFFQA001_02105 (rpoN) | T6SS01277 | protein | Global regulator | Aliivibrio fischeri strain FQ-A001 | chromosome (NZ_SJSX01000002) | 62995..64464 (-) | 501526930 | hcp1/hcp transcript (↓) |
REG0125 | VFFQA001_15620 (VasH) | T6SS01278 | protein | Global regulator | Aliivibrio fischeri strain FQ-A001 | chromosome (NZ_SJSX01000004) | 359608..360108 (+) | 1027725198 | Unknown (↓) |
Experimental investigation has been performed.
Bioinformatics investigation has been performed
Effector ID | Locus tag (Gene) | Classification | Cognate immunity protein | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | NCBI ID |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
Immunity protein ID | Locus tag (Gene) | Related T6SS | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Cognate effector |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
ID | Locus tag (Gene) | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Response to T6SS attack | Known or putative function |
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Experimental investigation has been performed.
Bioinformatics investigation has been performed
Accessory protein ID | Locus tag (Gene) | Related T6SS | Type | Organism | Replicon (Accession) | Coordinates (Strand) | Protein GI | Related structure protein | Related effector |
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