Agrobacterium fabrum strain 12D13

• Map 1
• T6SS gene clusters 1
• Effectors 2
• Immunity proteins 0
• Recipient susceptibility factors 0
• Regulators 0
• Accessory proteins 0

• NZ_CP033035 (chromosome)

NZ_CP033035 (chromosome)
 

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Experimental investigation has been performed.
Bioinformatics investigation has been performed

T6SS ID	Type	Organism	Replicon (Accession)	Location	Function
T6SS01243	i5	Agrobacterium fabrum strain 12D13	chromosome (NZ_CP033035)	1420086..1444587	anti-bacterial

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Regulator ID	Locus tag (Gene)	Related T6SS	Regulator type	Regulatory pathway	Organism	Replicon (Accession)	Coordinates (Strand)	NCBI ID	Target (Regulation)

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Effector ID	Locus tag (Gene)	Classification	Cognate immunity protein	Related T6SS	Organism	Replicon (Accession)	Coordinates (Strand)	NCBI ID
EFF01860	ATU_RS20360 (Tae4)	Tae	-	T6SS01243	Agrobacterium fabrum strain 12D13	chromosome (NZ_CP033035)	1480980..1481480 (+)	493359403
EFF01859	At12D13_RS20965 (Hcp)	-		T6SS01243	Agrobacterium fabrum strain 12D13	chromosome (NZ_CP033035)	1440824..1441300 (+)	489600119

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Immunity protein ID	Locus tag (Gene)	Related T6SS	Organism	Replicon (Accession)	Coordinates (Strand)	Protein GI	Cognate effector

Experimental investigation has been performed.
Bioinformatics investigation has been performed

ID	Locus tag (Gene)	Organism	Replicon (Accession)	Coordinates (Strand)	Protein GI	Response to T6SS attack	Known or putative function

Experimental investigation has been performed.
Bioinformatics investigation has been performed

Accessory protein ID	Locus tag (Gene)	Related T6SS	Type	Organism	Replicon (Accession)	Coordinates (Strand)	Protein GI	Related structure protein	Related effector