Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | ABFJ88_RS08555 | Genome accession | NZ_CP155815 |
| Coordinates | 1718368..1718679 (-) | Length | 103 a.a. |
| NCBI ID | WP_031786220.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain CUBIST-17 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1713368..1723679
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFJ88_RS08520 (ABFJ88_08545) | gcvPA | 1713870..1715216 (-) | 1347 | WP_000019691.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| ABFJ88_RS08525 (ABFJ88_08550) | gcvT | 1715236..1716327 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ABFJ88_RS08530 (ABFJ88_08555) | - | 1716486..1717010 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| ABFJ88_RS08535 (ABFJ88_08560) | - | 1717000..1717146 (-) | 147 | WP_001792109.1 | hypothetical protein | - |
| ABFJ88_RS08540 (ABFJ88_08565) | comGF | 1717243..1717740 (-) | 498 | WP_001788897.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABFJ88_RS08545 (ABFJ88_08570) | comGE | 1717658..1717957 (-) | 300 | WP_000844410.1 | hypothetical protein | Machinery gene |
| ABFJ88_RS08550 (ABFJ88_08575) | comGD | 1717944..1718390 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABFJ88_RS08555 (ABFJ88_08580) | comGC | 1718368..1718679 (-) | 312 | WP_031786220.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABFJ88_RS08560 (ABFJ88_08585) | comGB | 1718693..1719763 (-) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABFJ88_RS08565 (ABFJ88_08590) | comGA | 1719735..1720709 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABFJ88_RS08570 (ABFJ88_08595) | - | 1720761..1721384 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ABFJ88_RS08575 (ABFJ88_08600) | - | 1721381..1721710 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ABFJ88_RS08580 (ABFJ88_08605) | - | 1721710..1722696 (-) | 987 | WP_000161311.1 | ROK family glucokinase | - |
| ABFJ88_RS08585 (ABFJ88_08610) | - | 1722693..1722896 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11297.32 Da Isoelectric Point: 8.5268
>NTDB_id=999459 ABFJ88_RS08555 WP_031786220.1 1718368..1718679(-) (comGC) [Staphylococcus aureus strain CUBIST-17]
MFKFLKKTQAFTLIEILLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEILLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=999459 ABFJ88_RS08555 WP_031786220.1 1718368..1718679(-) (comGC) [Staphylococcus aureus strain CUBIST-17]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATACTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATACTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
99.029 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
99.029 |
100 |
0.99 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae D39 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae R6 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
45.098 |
99.029 |
0.447 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
50 |
83.495 |
0.417 |
| comGC/cglC | Streptococcus mitis SK321 |
50 |
83.495 |
0.417 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
41.837 |
95.146 |
0.398 |
| comYC | Streptococcus suis isolate S10 |
48.718 |
75.728 |
0.369 |