Detailed information NTG0999166

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EL124_RS20815
• Genome accession: NZ_LR134239
• Coordinates: 4291941..4292966 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NCTC9100
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4286941..4297966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL124_RS20795 (NCTC9100_04160)	metJ	4288001..4288318 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
EL124_RS20800 (NCTC9100_04161)	yiiX	4288502..4289110 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
EL124_RS20805 (NCTC9100_04162)	rpmE	4289171..4289383 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EL124_RS20810 (NCTC9100_04164)	priA	4289586..4291785 (+)	2200	Protein_4080	primosomal protein N'	-
EL124_RS20815 (NCTC9100_04165)	cytR	4291941..4292966 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EL124_RS20820 (NCTC9100_04166)	ftsN	4293058..4294017 (+)	960	WP_000068828.1	cell division protein FtsN	-
EL124_RS20825 (NCTC9100_04167)	hslV	4294110..4294640 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EL124_RS20830 (NCTC9100_04168)	hslU	4294650..4295981 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EL124_RS20835 (NCTC9100_04169)	menA	4296048..4296974 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EL124_RS20840 (NCTC9100_04170)	rraA	4297067..4297552 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EL124_RS20845 (NCTC9100_04171)	zapB	4297637..4297882 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=999166 EL124_RS20815 WP_000644904.1 4291941..4292966(+) (cytR) [Escherichia coli strain NCTC9100]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=999166 EL124_RS20815 WP_000644904.1 4291941..4292966(+) (cytR) [Escherichia coli strain NCTC9100]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628