Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | ABDZ24_RS16810 | Genome accession | NZ_CP155623 |
| Coordinates | 3175651..3176232 (+) | Length | 193 a.a. |
| NCBI ID | WP_000991615.1 | Uniprot ID | - |
| Organism | Bacillus paramobilis strain N24509 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3170651..3181232
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDZ24_RS16785 (ABDZ24_16830) | - | 3171787..3173154 (+) | 1368 | WP_098259214.1 | lytic polysaccharide monooxygenase | - |
| ABDZ24_RS16790 (ABDZ24_16835) | - | 3173272..3173706 (-) | 435 | WP_000555723.1 | GNAT family N-acetyltransferase | - |
| ABDZ24_RS16795 (ABDZ24_16840) | rpiA | 3173812..3174474 (-) | 663 | WP_033656356.1 | ribose 5-phosphate isomerase A | - |
| ABDZ24_RS16800 (ABDZ24_16845) | - | 3174479..3174799 (-) | 321 | WP_001125374.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| ABDZ24_RS16805 (ABDZ24_16850) | - | 3174943..3175629 (+) | 687 | WP_000337483.1 | RNA polymerase subunit sigma-70 | - |
| ABDZ24_RS16810 (ABDZ24_16855) | clpP | 3175651..3176232 (+) | 582 | WP_000991615.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| ABDZ24_RS16815 (ABDZ24_16860) | - | 3176278..3177135 (-) | 858 | WP_001227643.1 | glycine betaine ABC transporter substrate-binding protein | - |
| ABDZ24_RS16820 (ABDZ24_16865) | - | 3177307..3178512 (+) | 1206 | WP_346817313.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| ABDZ24_RS16825 (ABDZ24_16870) | - | 3178505..3179341 (+) | 837 | WP_000095064.1 | proline/glycine betaine ABC transporter permease | - |
| ABDZ24_RS16830 (ABDZ24_16875) | - | 3179390..3179626 (-) | 237 | WP_000553814.1 | hypothetical protein | - |
| ABDZ24_RS16835 (ABDZ24_16880) | - | 3179844..3180011 (+) | 168 | WP_000509285.1 | hypothetical protein | - |
| ABDZ24_RS16840 (ABDZ24_16885) | - | 3180124..3180603 (+) | 480 | WP_000106233.1 | HIT family protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21196.44 Da Isoelectric Point: 5.0776
>NTDB_id=998137 ABDZ24_RS16810 WP_000991615.1 3175651..3176232(+) (clpP) [Bacillus paramobilis strain N24509]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
SIERIAHDTERDYFMTAEEAKAYGIVDDVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
SIERIAHDTERDYFMTAEEAKAYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=998137 ABDZ24_RS16810 WP_000991615.1 3175651..3176232(+) (clpP) [Bacillus paramobilis strain N24509]
ATGAATGCAATTCCATATGTAGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCACGGTTATTAAAAGA
TCGCATTATTATTATCGGTTCAGAAATAAATGATCAAGTAGCAAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCGG
AAGATGCCGAGAAAGATATATTTTTATACATTAACAGCCCAGGTGGTTCAACGACAGCAGGTTTTGCCATATTAGATACG
ATGAATTTAATCAAACCAGATGTGCAAACACTATGCATGGGATTTGCAGCATCATTTGGTGCGTTGTTATTATTATCAGG
TGCAAAAGGGAAACGGTTTGCACTCCCTAATAGTGAAATTATGATTCATCAACCGCTTGGTGGTGCGCAAGGTCAAGCAA
CGGAAATTGAAATCACAGCAAAAAGGATATTGAAGTTAAAACATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
TCGATTGAGAGAATAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATAGTAGA
TGATGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTAGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCACGGTTATTAAAAGA
TCGCATTATTATTATCGGTTCAGAAATAAATGATCAAGTAGCAAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCGG
AAGATGCCGAGAAAGATATATTTTTATACATTAACAGCCCAGGTGGTTCAACGACAGCAGGTTTTGCCATATTAGATACG
ATGAATTTAATCAAACCAGATGTGCAAACACTATGCATGGGATTTGCAGCATCATTTGGTGCGTTGTTATTATTATCAGG
TGCAAAAGGGAAACGGTTTGCACTCCCTAATAGTGAAATTATGATTCATCAACCGCTTGGTGGTGCGCAAGGTCAAGCAA
CGGAAATTGAAATCACAGCAAAAAGGATATTGAAGTTAAAACATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
TCGATTGAGAGAATAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATAGTAGA
TGATGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
68.586 |
98.964 |
0.679 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.725 |
97.927 |
0.663 |
| clpP | Streptococcus pyogenes JRS4 |
56.614 |
97.927 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
56.614 |
97.927 |
0.554 |
| clpP | Streptococcus pneumoniae R6 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae Rx1 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae D39 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus thermophilus LMG 18311 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus thermophilus LMD-9 |
54.167 |
99.482 |
0.539 |
| clpP | Streptococcus mutans UA159 |
54.497 |
97.927 |
0.534 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
53.439 |
97.927 |
0.523 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
51.323 |
97.927 |
0.503 |