Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   NSQ14_RS08230 Genome accession   NZ_CP155467
Coordinates   1738615..1739850 (+) Length   411 a.a.
NCBI ID   WP_034769898.1    Uniprot ID   A0A090KRZ1
Organism   Caldifermentibacillus hisashii strain FSL W8-0862     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1733615..1744850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ14_RS08205 (NSQ14_08205) - 1734650..1735381 (+) 732 WP_034769892.1 elongation factor P 5-aminopentanone reductase -
  NSQ14_RS08210 (NSQ14_08210) - 1735552..1735809 (+) 258 WP_034769894.1 DUF3243 domain-containing protein -
  NSQ14_RS08215 (NSQ14_08215) - 1736140..1736931 (+) 792 WP_095141166.1 DUF3388 domain-containing protein -
  NSQ14_RS08220 (NSQ14_08220) - 1736949..1737845 (+) 897 WP_041903276.1 RodZ domain-containing protein -
  NSQ14_RS08225 (NSQ14_08225) pgsA 1737963..1738541 (+) 579 WP_346217071.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  NSQ14_RS08230 (NSQ14_08230) cinA 1738615..1739850 (+) 1236 WP_034769898.1 competence/damage-inducible protein A Machinery gene
  NSQ14_RS08235 (NSQ14_08235) - 1740049..1740297 (+) 249 WP_034769901.1 hypothetical protein -
  NSQ14_RS08240 (NSQ14_08240) - 1740345..1740695 (+) 351 WP_034769902.1 hypothetical protein -
  NSQ14_RS08245 (NSQ14_08245) - 1740833..1741279 (+) 447 WP_034769958.1 YaiI/YqxD family protein -
  NSQ14_RS08250 (NSQ14_08250) - 1741461..1741598 (-) 138 WP_346217072.1 hypothetical protein -
  NSQ14_RS08255 (NSQ14_08255) - 1741622..1741759 (+) 138 WP_156103201.1 hypothetical protein -
  NSQ14_RS08260 (NSQ14_08260) - 1741773..1742171 (-) 399 WP_034769905.1 hypothetical protein -
  NSQ14_RS08265 (NSQ14_08265) - 1742247..1743161 (-) 915 WP_231553313.1 CAP domain-containing protein -
  NSQ14_RS08270 (NSQ14_08270) - 1743633..1743734 (+) 102 WP_268756472.1 putative holin-like toxin -
  NSQ14_RS08275 (NSQ14_08275) - 1744180..1744350 (+) 171 WP_231553317.1 metal-sensing transcriptional repressor -

Sequence

Protein


Download         Length: 411 a.a.        Molecular weight: 45203.66 Da        Isoelectric Point: 4.9457

>NTDB_id=996625 NSQ14_RS08230 WP_034769898.1 1738615..1739850(+) (cinA) [Caldifermentibacillus hisashii strain FSL W8-0862]
MNGEIIAVGSELLLGQIANTNAKFISQQLAGIGVNVFYHTVVGDNAERLKRAVEIAESRSNLIIFTGGLGPTKDDLTKET
IANHLGVKLVHNEAALGSIEEFFRKRNVTMTPNNRKQALVFEHAEVLPNDTGMAPGMVLTKNEITYMLLPGPPSEMEPMF
SNYGMKAILNRLESIDRIESRVLRFFGIGESTLEHTLEDFIDQQTNPTIAPLASDGEVTLRLTAKHPSDLERRRLLDETE
AKIMERVGEFFYGYDETTIIKEMGNLIESNNMTLSVAESLTGGLFQEEVTSIAGVSKWFQGGIVSYSPEIKINVLGVNPD
TVETYGVVSKECAMEMAENVRKLMDTDIGISFTGVAGPASLEGKEPGSVYIGVSFKNKPTASHFVLLPGNRETVRVRAVK
TGAWYILKELR

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=996625 NSQ14_RS08230 WP_034769898.1 1738615..1739850(+) (cinA) [Caldifermentibacillus hisashii strain FSL W8-0862]
TTGAATGGTGAAATTATTGCAGTTGGGTCCGAATTATTACTTGGCCAAATTGCTAATACGAATGCAAAATTTATTTCTCA
ACAATTGGCCGGTATTGGGGTAAATGTATTTTACCATACCGTTGTTGGGGATAATGCCGAGCGGTTGAAAAGAGCGGTGG
AAATTGCCGAAAGTCGTTCCAATTTAATTATTTTTACGGGTGGCTTAGGGCCTACAAAAGATGATTTAACAAAAGAAACC
ATTGCAAATCATCTGGGAGTAAAGCTTGTTCATAATGAAGCGGCTCTTGGCTCGATAGAAGAATTTTTTAGAAAACGGAA
TGTTACCATGACACCGAATAATCGGAAACAAGCACTTGTTTTTGAACATGCGGAGGTTTTGCCAAACGATACCGGAATGG
CACCGGGAATGGTGTTAACAAAAAATGAAATTACTTATATGCTACTTCCCGGTCCGCCTAGTGAAATGGAGCCGATGTTT
TCAAATTATGGTATGAAAGCAATCCTAAATCGGTTGGAATCCATTGATCGAATTGAATCTCGTGTGTTACGATTTTTTGG
TATTGGTGAATCAACTCTGGAACATACGCTGGAAGATTTCATTGATCAGCAGACAAACCCGACCATTGCCCCGCTCGCTT
CTGATGGCGAAGTGACATTGCGGCTTACAGCTAAACATCCCTCAGATCTTGAACGAAGAAGGTTACTGGATGAGACAGAA
GCAAAAATTATGGAGCGGGTGGGTGAATTTTTTTACGGATATGATGAAACAACGATTATCAAAGAAATGGGCAATTTGAT
TGAAAGCAACAACATGACACTTTCGGTAGCTGAAAGTTTAACGGGCGGACTGTTTCAGGAAGAAGTGACATCCATTGCCG
GTGTCAGCAAATGGTTTCAGGGCGGGATCGTATCGTATTCCCCTGAAATAAAAATAAATGTACTTGGCGTAAATCCGGAC
ACTGTTGAAACTTATGGTGTCGTCAGTAAAGAATGCGCAATGGAGATGGCAGAAAATGTCCGAAAATTGATGGACACTGA
TATCGGAATCAGCTTTACCGGTGTTGCCGGACCAGCCTCATTGGAAGGAAAAGAACCCGGTTCAGTTTATATTGGTGTGT
CATTTAAGAATAAGCCTACCGCTAGTCATTTTGTCTTATTGCCGGGAAACAGAGAAACGGTTCGTGTCCGTGCCGTAAAA
ACCGGTGCATGGTATATATTAAAGGAACTTCGGTAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-404)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-165)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A090KRZ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

61.425

99.027

0.608
  cinA Streptococcus mutans UA159

45.926

98.54

0.453
  cinA Streptococcus pneumoniae TIGR4

48.042

93.187

0.448
  cinA Streptococcus mitis NCTC 12261

47.781

93.187

0.445
  cinA Streptococcus mitis SK321

47.781

93.187

0.445
  cinA Streptococcus pneumoniae Rx1

47.781

93.187

0.445
  cinA Streptococcus pneumoniae R6

47.781

93.187

0.445
  cinA Streptococcus pneumoniae D39

47.52

93.187

0.443
  cinA Streptococcus suis isolate S10

39.578

92.214

0.365

Multiple sequence alignment